RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 OR10G7Q8NGN6 311 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 OR10AG1Q8NH19 301 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 OR1L1Q8NH94 360 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 VSTM2AQ8TAG5 236 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 LSM10Q969L4 123 aaKnown RBP2.58□□□□□ -2
CSDE1-216ENST00000534389 ELSPBP1Q96BH3 223 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 GPR82Q96P67 336 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 OR2A5Q96R48 311 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 RAB40CQ96S21 281 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 SPIN2AQ99865 258 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 SPIN2BQ9BPZ2 258 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 C1QTNF4Q9BXJ3 329 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 MOB1AQ9H8S9 216 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 WDR54Q9H977 334 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 FGF22Q9HCT0 170 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 SH2D2AQ9NP31 389 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 CCL28Q9NRJ3 127 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 KCNIP2Q9NS61 270 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 FGF21Q9NSA1 209 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 PSENENQ9NZ42 101 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 CACNG5Q9UF02 275 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 NAT8BQ9UHF3 227 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 PRO0461Q9UI25 63 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 ZNF391Q9UJN7 358 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 ERG28Q9UKR5 140 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 MPC1Q9Y5U8 109 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 SPCS1Q9Y6A9 102 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 CPAMD8Q8IZJ3 1885 aa2.58□□□□□ -2
CSDE1-216ENST00000534389 SNRNP200O75643 2136 aaKnown RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 FREM3P0C091 2139 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 TRAV36DV7A0A075B6V5 113 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 A8MZ25 164 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 C21orf140B9A014 251 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 H0Y980 276 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 C16orf97H3BN30 126 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 SYS1-DBNDD2H3BUS1 97 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 M0R2Z0 102 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 SYNGR2O43760 224 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 PGLYRP1O75594 196 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 WISP2O76076 250 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 OR7C1O76099 320 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 UTS2O95399 124 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 NCR2O95944 276 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 PPYP01298 95 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 IGLV2-8P01709 118 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 APCSP02743 223 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 SP9P0CG40 484 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 COX8AP10176 69 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 ZNF823P16415 610 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 HTR1DP28221 377 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 CMPK1P30085 196 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 FCGR2BP31994 310 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 GPM6AP51674 278 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 FOXG1P55316 489 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 ATP5J2P56134 94 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 TCL1AP56279 114 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 HERV-K104P61576 105 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 RPL8P62917 257 aaKnown RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 CCL7P80098 99 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 MFAP5Q13361 173 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 GPM6BQ13491 265 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 SGCBQ16585 318 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 CCL14Q16627 93 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 RPEL1Q2QD12 228 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 TIGITQ495A1 244 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 PDLIM3Q53GG5 364 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 FAM69BQ5VUD6 431 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 MRPL54Q6P161 138 aaKnown RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 TMEM14EPQ6UXP3 125 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.57□□□□□ -23e-9■□□□□ 9.7
CSDE1-216ENST00000534389 ZNF818PQ6ZRF7 136 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 SHISA6Q6ZSJ9 500 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 Q6ZSR3 168 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 SH2D6Q7Z4S9 175 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 OOSP2Q86WS3 158 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 CA13Q8N1Q1 262 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 GAPTQ8N292 157 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 GCSAMQ8N6F7 178 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 TSTD1Q8NFU3 115 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 OR5A2Q8NGI9 324 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 OR5A1Q8NGJ0 315 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 LMX1AQ8TE12 382 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 ZNF418Q8TF45 676 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 PHLDA1Q8WV24 401 aaPredicted RBP2.57□□□□□ -2
CSDE1-216ENST00000534389 LRRC29Q8WV35 223 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 PIGTQ969N2 578 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 C11orf52Q96A22 123 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 RAB37Q96AX2 223 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 TMEM45BQ96B21 275 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 CLDN23Q96B33 292 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 BORCS7Q96B45 105 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 GALMQ96C23 342 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 C20orf78Q9BR46 151 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 LYRM4Q9HD34 91 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 B4GALT7Q9UBV7 327 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 ARL2-SNX15V9GYD0 113 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 KIAA1549Q9HCM3 1950 aa2.57□□□□□ -2
CSDE1-216ENST00000534389 LRRK1Q38SD2 2015 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms