RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 AMBPP02760 352 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 COX7A1P24310 79 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 CD34P28906 385 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 GLP1RP43220 463 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 CAV2P51636 162 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 EFNB2P52799 333 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 PSG5Q15238 335 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM128Q5BJH2 165 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 C6orf226Q5I0X4 101 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 ZNF626Q68DY1 528 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 FAAP20Q6NZ36 180 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 C19orf35Q6ZS72 473 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 ABHD12Q8N2K0 398 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 OR10D4PQ8NGN7 298 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 OR13C8Q8NGS7 320 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 MRPL30Q8TCC3 161 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 ARL11Q969Q4 196 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 MALSU1Q96EH3 234 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 KIRREL1Q96J84 757 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 CXorf58Q96LI9 332 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 GINS4Q9BRT9 223 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 PECRQ9BY49 303 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 MMP28Q9H239 520 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 MBNL3Q9NUK0 354 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 CALYQ9NYX4 217 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 IDI2-AS1Q9NZ38 188 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 TRAPPC2LQ9UL33 140 aa5.06□□□□□ -1.6
ATPAF1-209ENST00000529214 DSCAML1Q8TD84 2053 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 A0A1W2PPE3 182 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 COLCA2A8K830 154 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 RNF212BA8MTL3 300 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 NAPSAO96009 420 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 IGLV1-47P01700 117 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ORM1P02763 201 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 MT-ND4LP03901 98 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 NMBP08949 121 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ZBTB25P24278 435 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 IER3P46695 156 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 PIGPP57054 158 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 NCS1P62166 190 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 GAGE5Q13069 117 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 GAGE6Q13070 117 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 CTF1Q16619 201 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 LTC4SQ16873 150 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 MINOS1Q5TGZ0 78 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM268Q5VZI3 342 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 FAM71F2Q6NXP2 309 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ZNF880Q6PDB4 577 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 NRARPQ7Z6K4 114 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ZNF664Q8N3J9 261 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM86BQ8N661 226 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 LFNGQ8NES3 379 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM158Q8WZ71 300 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ARHGAP5-AS1Q96IT6 56 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 SIGMAR1Q99720 223 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 CLEC7AQ9BXN2 247 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ZNF286AQ9HBT8 521 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 SMCO4Q9NRQ5 59 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ABRACLQ9P1F3 81 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 ZNRD1Q9P1U0 126 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 AK3Q9UIJ7 227 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 MINOS1-NBL1R4GNA1 71 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 JMJD1CQ15652 2540 aa5.05□□□□□ -1.6
ATPAF1-209ENST00000529214 C2CD3Q4AC94 2353 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 KIAA2026Q5HYC2 2103 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 TRBV6-6A0A0A6YYG2 114 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 DNAJC9-AS1A6NH13 148 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 C12orf77C9JDV5 145 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 LY6LH3BQJ8 138 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 BUB1B-PAK6H3BSN5 160 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 J3QR06 171 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 SPINT2O43291 252 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 GABARAPO95166 117 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 CDS2O95674 445 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 HPRT1P00492 218 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 IFNA1P01562 189 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 IGHV4-59P01825 116 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 HBZP02008 142 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 RNASE1P07998 156 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 GIPP09681 153 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 NFYBP25208 207 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 HTR1DP28221 377 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 PAX9P55771 341 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 PLP1P60201 277 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 UBA52P62987 128 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 GNMTQ14749 295 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 HERPUD1Q15011 391 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 SRSF7Q16629 238 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 KRTAP24-1Q3LI83 254 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 TPTE2P1Q5T6R2 138 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 OLFML2AQ68BL7 652 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 Q6ZPA2 131 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 H2BFWTQ7Z2G1 175 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 C5orf24Q7Z6I8 188 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 C1QL4Q86Z23 238 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 DYNAPQ8N1N2 210 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 OR4A16Q8NH70 328 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 OR9G1Q8NH87 305 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms