RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TMEM41BQ5BJD5 291 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 C22orf42Q6IC83 251 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 MORN3Q6PF18 240 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 UBE2DNLQ8IWF7 75 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 MAPKAPK5-AS1Q8N8E1 139 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 CSNK1G2-AS1Q8NCQ2 148 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 PINX1Q96BK5 328 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 TMEM56Q96MV1 263 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 TXN2Q99757 166 aa14.59□□□□□ -0.07
SQSTM1-215ENST00000514093 LRP1BQ9NZR2 4599 aa14.58□□□□□ -0.08
SQSTM1-215ENST00000514093 ACTL10Q5JWF8 245 aa14.58□□□□□ -0.08
SQSTM1-215ENST00000514093 STXBP6Q8NFX7 210 aa14.58□□□□□ -0.08
SQSTM1-215ENST00000514093 FCAMRQ8WWV6 532 aa14.58□□□□□ -0.08
SQSTM1-215ENST00000514093 TMEM14BQ9NUH8 114 aa14.58□□□□□ -0.08
SQSTM1-215ENST00000514093 TRAV2A0A0B4J234 112 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 IFNA21P01568 189 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 IFNA17P01571 189 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 RLN1P04808 185 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 ZNF688P0C7X2 276 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 GNRHRP30968 328 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 Q6ZRM9 215 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 HOGA1Q86XE5 327 aa14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 PUS1Q9Y606 427 aaKnown RBP eCLIP14.57□□□□□ -0.08
SQSTM1-215ENST00000514093 TRDV1A0A1B0GX56 115 aa14.56□□□□□ -0.08
SQSTM1-215ENST00000514093 K7EQG2 157 aa14.56□□□□□ -0.08
SQSTM1-215ENST00000514093 F2RP25116 425 aa14.56□□□□□ -0.08
SQSTM1-215ENST00000514093 ZFAND3Q9H8U3 227 aa14.56□□□□□ -0.08
SQSTM1-215ENST00000514093 DAPK2Q9UIK4 370 aa14.56□□□□□ -0.08
SQSTM1-215ENST00000514093 TRAV18A0A075B6X5 111 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 CD74P04233 296 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 NPY1RP25929 384 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 SOHLH1Q5JUK2 328 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 PRSS48Q7RTY5 328 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 TPRA1Q86W33 373 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 LGALS14Q8TCE9 139 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 MOB3AQ96BX8 217 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 PRNDQ9UKY0 176 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 HERC1Q15751 4861 aa14.55□□□□□ -0.08
SQSTM1-215ENST00000514093 A0A1B0GU03 582 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 NOTOA8MTQ0 251 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 C16orf90A8MZG2 172 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 PGLYRP1O75594 196 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 SCGNO76038 276 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 NDUFB11Q9NX14 153 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 FKBP11Q9NYL4 201 aa14.54□□□□□ -0.08
SQSTM1-215ENST00000514093 MEIS3P1A6NDR6 274 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 C1orf134Q5TEV5 83 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 ZNF600Q6ZNG1 722 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 TSPAN14Q8NG11 270 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 VCXQ9H320 206 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 RHBDL2Q9NX52 303 aa14.53□□□□□ -0.08
SQSTM1-215ENST00000514093 CDK2AP2O75956 126 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 NPPCP23582 126 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 HERV-K104P61576 105 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 ZNF367Q7RTV3 350 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 GRAMD2BQ96HH9 432 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 TMEM231Q9H6L2 316 aa14.52□□□□□ -0.09
SQSTM1-215ENST00000514093 PPP5CP53041 499 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 EMP1P54849 157 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 OR5AP2Q8NGF4 316 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 DCANP1Q8TF63 244 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 RAB40CQ96S21 281 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 XCL2Q9UBD3 114 aa14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 RRP15Q9Y3B9 282 aaKnown RBP14.51□□□□□ -0.09
SQSTM1-215ENST00000514093 TMEM50AO95807 157 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 P2RY1P47900 373 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 NPBWR1P48145 328 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 TNP2Q05952 138 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 SPINK9Q5DT21 86 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 CADM3Q8N126 398 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 ZNF114Q8NC26 417 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 OR5H6Q8NGV6 325 aa14.5□□□□□ -0.09
SQSTM1-215ENST00000514093 A0A1W2PS18 150 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 RFX2P48378 723 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 AQP4P55087 323 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 TBCEQ15813 527 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 PSMG4Q5JS54 123 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 BORCS5Q969J3 196 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 TSC22D3Q99576 134 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 ZNF2Q9BSG1 426 aaPredicted RBP14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 EHFQ9NZC4 300 aa14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 APOBP04114 4563 aaKnown RBP14.49□□□□□ -0.09
SQSTM1-215ENST00000514093 SPART-AS1P0CW21 52 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 PRCDQ00LT1 54 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 SFXN4Q6P4A7 337 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 OR4A16Q8NH70 328 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 SLC25A38Q96DW6 304 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 AUNIPQ9H7T9 357 aa14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 TXNL4BQ9NX01 149 aaKnown RBP14.48□□□□□ -0.09
SQSTM1-215ENST00000514093 ERHP84090 104 aaKnown RBP14.47□□□□□ -0.09
SQSTM1-215ENST00000514093 DHRS2Q13268 280 aa14.47□□□□□ -0.09
SQSTM1-215ENST00000514093 METTL26Q96S19 204 aa14.47□□□□□ -0.09
SQSTM1-215ENST00000514093 HTN3P15516 51 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 CRYBB3P26998 211 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 RNF212Q495C1 297 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 DHRS11Q6UWP2 260 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 CMTM1Q8IZ96 169 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 Q8N1X5 172 aa14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 MRPL36Q9P0J6 103 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-215ENST00000514093 DNAH5Q8TE73 4624 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms