RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 SELENOKQ9Y6D0 94 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM56-RWDD3S4R434 201 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 MT-CO2P00403 227 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 IFNA17P01571 189 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 CTSGP08311 255 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 FCGR2BP31994 310 aaPredicted RBP8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 ETV6P41212 452 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 ELLP55199 621 aaPredicted RBP8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM187Q14656 261 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 GTSCR1Q86UQ5 136 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 MISP3Q96FF7 219 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 GALNT14Q96FL9 552 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 SCGB3A2Q96PL1 93 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
SH3RF1-205ENST00000511421 NDUFA4O00483 81 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 Q56UQ5 140 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM268Q5VZI3 342 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 SLC35G3Q8N808 338 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 UBAC2Q8NBM4 344 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 RNASE11Q8TAA1 199 aaKnown RBP8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 MARC2Q969Z3 335 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 GPR146Q96CH1 333 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 WDR89Q96FK6 387 aaPredicted RBP8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 MRPL27Q9P0M9 148 aaKnown RBP8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 UFC1Q9Y3C8 167 aa8.74□□□□□ -1.01
SH3RF1-205ENST00000511421 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 CD7P09564 240 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 RNASE2P10153 161 aaKnown RBP8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 MFAP4P55083 255 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 SUPT4H1P63272 117 aaKnown RBP8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 GUCA2BQ16661 112 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 OR52E5Q8NH55 327 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 IL22RA2Q969J5 263 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 TXN2Q99757 166 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 PDCD10Q9BUL8 212 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 CACNG5Q9UF02 275 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 KCNIP3Q9Y2W7 256 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
SH3RF1-205ENST00000511421 FAUP35544 74 aaKnown RBP8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 SNCAP37840 140 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 HOXA1P49639 335 aaPredicted RBP8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 AP3S2P59780 193 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 CD81P60033 236 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 SPCS3P61009 180 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 BSXQ3C1V8 233 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 PINX1Q96BK5 328 aaKnown RBP8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 SRRQ9GZT4 340 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 IGHV3OR16-8A0A075B7F1 116 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 K7EMT4 169 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 AKR1C4P17516 323 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 SPANXN2Q5MJ10 180 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 LINC00322Q6ZN03 302 aaPredicted RBP8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 DEDD2Q8WXF8 326 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 RCHY1Q96PM5 261 aa8.72□□□□□ -1.01
SH3RF1-205ENST00000511421 TRAV25A0A0B4J276 109 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 NUPL2O15504 423 aaKnown RBP8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 SCAF4O95104 1147 aaKnown RBP8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 SUB1P53999 127 aaKnown RBP eCLIP8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 HAGHQ16775 308 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 C20orf24Q9BUV8 137 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 WFDC10AQ9H1F0 79 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 FNDC4Q9H6D8 234 aaPredicted RBP8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 TUBA4BQ9H853 241 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 ENY2Q9NPA8 101 aa8.71□□□□□ -1.02
SH3RF1-205ENST00000511421 A0A0B4J2A0 478 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 C15orf62A8K5M9 175 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 OR11H12B2RN74 326 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 GNG7O60262 68 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 MLANAQ16655 118 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 LYZL2Q7Z4W2 148 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 DEFB125Q8N687 156 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 DUSP18Q8NEJ0 188 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 SDHCQ99643 169 aaPredicted RBP8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 MRPL36Q9P0J6 103 aaKnown RBP8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 SHPKQ9UHJ6 478 aa8.7□□□□□ -1.02
SH3RF1-205ENST00000511421 CORTO00230 105 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 TMEM50AO95807 157 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 SULT1A3P0DMM9 295 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 SULT1A4P0DMN0 295 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 NPBWR1P48145 328 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 BAK1Q16611 211 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 TMEM128Q5BJH2 165 aa8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
SH3RF1-205ENST00000511421 LGI3Q8N145 548 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms