RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TEPPQ6URK8 271 aa9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 TREML4Q6UXN2 200 aa9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 NPCDR1Q9BY65 106 aa9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-210ENST00000504677 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 REG1AP05451 166 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 CAMLGP49069 296 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 DEFB112Q30KQ8 113 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 RSG1Q9BU20 258 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.9
POLR2J3-210ENST00000504677 DEFA4P12838 97 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 HNF1AP20823 631 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 NDPQ00604 133 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 SCGB2A2Q13296 93 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 Q6ZRG5 221 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 TMEM219Q86XT9 240 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 WNT10AQ9GZT5 417 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
POLR2J3-210ENST00000504677 MAST4O15021 2626 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 VPS13CQ709C8 3753 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 TEX46H3BTG2 121 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 HIST1H1BP16401 226 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 RAB2AP61019 212 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 GAMTQ14353 236 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 PXDC1Q5TGL8 231 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 COMMD7Q86VX2 200 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 FAM110DQ8TAY7 271 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 MISP3Q96FF7 219 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 CXorf58Q96LI9 332 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 MGST2Q99735 147 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 HSPB9Q9BQS6 159 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 FAM103A1Q9BTL3 118 aaKnown RBP9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 GGTLC1Q9BX51 225 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 THYN1Q9P016 225 aa9.44□□□□□ -0.9
POLR2J3-210ENST00000504677 NAV3Q8IVL0 2385 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 AGPAT2O15120 278 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 TSPAN15O95858 294 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 HBE1P02100 147 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 APELAP0DMC3 54 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 IER3P46695 156 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 MFAP2P55001 183 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 LY6EQ16553 131 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 AKIRIN2Q53H80 203 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ASPHD1Q5U4P2 390 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 Q6YL49 198 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 SPNS3Q6ZMD2 512 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 IL34Q6ZMJ4 242 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 BCL6BQ8N143 479 aaPredicted RBP9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 COMMD1Q8N668 190 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 THAP8Q8NA92 274 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 LFNGQ8NES3 379 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 FNDC4Q9H6D8 234 aaPredicted RBP9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 TMEM160Q9NX00 188 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 VPREB3Q9UKI3 123 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 ABCA1O95477 2261 aa9.43□□□□□ -0.9
POLR2J3-210ENST00000504677 PDZD2O15018 2839 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 IGLV11-55A0A075B6I3 123 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 MDFIC2A0A1B0GVS7 189 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 ATP6V0E1O15342 81 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 MT-CO2P00403 227 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 IGHV4-59P01825 116 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 AMY1AP04745 511 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 M6PRP20645 277 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 ELLP55199 621 aaPredicted RBP9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 SELENOTP62341 195 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 KRTAP1-1Q07627 177 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 UNQ5815/PRO19632Q6UWF5 114 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 TMEM116Q8NCL8 245 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 KLK9Q9UKQ9 250 aa9.42□□□□□ -0.9
POLR2J3-210ENST00000504677 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
POLR2J3-210ENST00000504677 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
POLR2J3-210ENST00000504677 I3L2K1 104 aa9.41□□□□□ -0.9
POLR2J3-210ENST00000504677 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
POLR2J3-210ENST00000504677 IGHG2P01859 326 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms