RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 HIST1H1TP22492 207 aaPredicted RBP0.87□□□□□ -2.27
CD46-218ENST00000496723 OMPP47874 163 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 SURF2Q15527 256 aaPredicted RBP0.87□□□□□ -2.27
CD46-218ENST00000496723 C10orf55Q5SWW7 151 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 ANKRD29Q8N6D5 301 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 C9orf163Q8N9P6 203 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 CCDC42Q96M95 316 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 FBXL12Q9NXK8 326 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 OR5AC2Q9NZP5 309 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 VPS29Q9UBQ0 182 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 CEP192Q8TEP8 1941 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 KIF1BO60333 1816 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 TNRC6BQ9UPQ9 1833 aaKnown RBP0.87□□□□□ -2.27
CD46-218ENST00000496723 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 SCN10AQ9Y5Y9 1956 aa0.87□□□□□ -2.27
CD46-218ENST00000496723 ADCY9O60503 1353 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TRAV9-1A0A075B6T8 112 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TRAV14DV4A0A0A6YYC5 116 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TGIF2-C20orf24A0A0A6YYL0 155 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 PQLC2LA1A4F0 135 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TMEM212A6NML5 194 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 GOLGA6L19H0YKK7 550 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 CRYZL1O95825 349 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 CLPSP04118 112 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 SHBGP04278 402 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 SERPINA6P08185 405 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 HTR1AP08908 422 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 KCNJ8Q15842 424 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 MIR17HGQ75NE6 70 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 DEFB128Q7Z7B8 93 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TRAPPC5Q8IUR0 188 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 Q8N2B8 174 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 C12orf29Q8N999 325 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 ZNF439Q8NDP4 499 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 OR4D11Q8NGI4 311 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 DNAJC9Q8WXX5 260 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TOMM6Q96B49 74 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 CMSS1Q9BQ75 279 aaKnown RBP0.86□□□□□ -2.27
CD46-218ENST00000496723 ULBP3Q9BZM4 244 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TMEM56-RWDD3S4R434 201 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 TAF1LQ8IZX4 1826 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 RIC1Q4ADV7 1423 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 SBF1O95248 1867 aa0.86□□□□□ -2.27
CD46-218ENST00000496723 MYH10P35580 1976 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 A0A0D9SG52 128 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 EXOC1LA0A1B0GW35 172 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 CLDN24A6NM45 220 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 CHP2O43745 196 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 RPP14O95059 124 aaKnown RBP0.85□□□□□ -2.27
CD46-218ENST00000496723 ROS1P08922 2347 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 RPL5P46777 297 aaKnown RBP0.85□□□□□ -2.27
CD46-218ENST00000496723 WRNQ14191 1432 aaPredicted RBP eCLIP0.85□□□□□ -2.27
CD46-218ENST00000496723 KISS1Q15726 138 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 ACOT6Q3I5F7 207 aaPredicted RBP0.85□□□□□ -2.27
CD46-218ENST00000496723 KHDC3LQ587J8 217 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 SPANXN5Q5MJ07 72 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 LCN15Q6UWW0 184 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 DPPA3Q6W0C5 159 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 ZNF826PQ6ZT77 177 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 BPIFA4PQ86YQ2 179 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 CLDN22Q8N7P3 220 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 PPP1R2P1Q96PQ5 205 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 NIPSNAP1Q9BPW8 284 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 REG4Q9BYZ8 158 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 C11orf68Q9H3H3 251 aaKnown RBP0.85□□□□□ -2.27
CD46-218ENST00000496723 SLC39A9Q9NUM3 307 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 SCN3AQ9NY46 2000 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 PKIGQ9Y2B9 76 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 SNURFQ9Y675 71 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 HECW1Q76N89 1606 aa0.85□□□□□ -2.27
CD46-218ENST00000496723 TNRC6AQ8NDV7 1962 aaKnown RBP0.85□□□□□ -2.27
CD46-218ENST00000496723 COL4A5P29400 1685 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 TECTAO75443 2155 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 MTUS2Q5JR59 1369 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 DOCK3Q8IZD9 2030 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 HECW2Q9P2P5 1572 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 NCOA1Q15788 1441 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 IGKV2D-26A0A0A0MRZ7 120 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 FAAHO00519 579 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 PIRO00625 290 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 HCRTO43612 131 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 PLCXD2Q0VAA5 305 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 ZNF846Q147U1 533 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 CLVS1Q8IUQ0 354 aaPredicted RBP0.84□□□□□ -2.27
CD46-218ENST00000496723 ZNF565Q8N9K5 539 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 MNS1Q8NEH6 495 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 OR4E2Q8NGC2 313 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 OR8J2Q8NGG1 315 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 OR4C6Q8NH72 309 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 H1FXQ92522 213 aaKnown RBP0.84□□□□□ -2.27
CD46-218ENST00000496723 PPP1R14BQ96C90 147 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 C8orf76Q96K31 380 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 PARD6GQ9BYG4 376 aaPredicted RBP0.84□□□□□ -2.27
CD46-218ENST00000496723 TRABDQ9H4I3 376 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 TP73-AS1Q9UF72 201 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 ERGIC3Q9Y282 383 aa0.84□□□□□ -2.27
CD46-218ENST00000496723 TENM3Q9P273 2699 aa0.84□□□□□ -2.28
CD46-218ENST00000496723 PLB1Q6P1J6 1458 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms