RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 SRD5A3Q9H8P0 318 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
HSPG2-212ENST00000493940 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 MT-CO2P00403 227 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 OR5AC1P0C628 307 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 RNASE2P10153 161 aaKnown RBP9.4□□□□□ -0.9
HSPG2-212ENST00000493940 S100GP29377 79 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 ELLP55199 621 aaPredicted RBP9.4□□□□□ -0.9
HSPG2-212ENST00000493940 Q56UQ5 140 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 SELENOHQ8IZQ5 122 aaKnown RBP9.4□□□□□ -0.9
HSPG2-212ENST00000493940 ZNF114Q8NC26 417 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 C6orf62Q9GZU0 229 aaPredicted RBP9.4□□□□□ -0.9
HSPG2-212ENST00000493940 SLC2A8Q9NY64 477 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 COPZ2Q9P299 210 aa9.4□□□□□ -0.9
HSPG2-212ENST00000493940 TEX13DA0A0J9YY54 714 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-212ENST00000493940 NDUFA4O00483 81 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-212ENST00000493940 CDS2O95674 445 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 AKAIN1P0CW23 69 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 SSBP1Q04837 148 aaKnown RBP9.39□□□□□ -0.91
HSPG2-212ENST00000493940 MEF2DQ14814 521 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 LILRB2Q8N423 598 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
HSPG2-212ENST00000493940 GPR146Q96CH1 333 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 BCL7BQ9BQE9 202 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 SPATA25Q9BR10 227 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 FNDC4Q9H6D8 234 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-212ENST00000493940 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 UBQLN2Q9UHD9 624 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
HSPG2-212ENST00000493940 IGHV3OR16-13A0A075B7E8 117 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 IGHV3-74A0A0B4J1X5 117 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 CRYM-AS1A6NIL9 109 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 APOHP02749 345 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-212ENST00000493940 AKR1C2P52895 323 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 MFAP4P55083 255 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
HSPG2-212ENST00000493940 MRPS10P82664 201 aaKnown RBP9.38□□□□□ -0.91
HSPG2-212ENST00000493940 TRIM16LQ309B1 348 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 OR52B4Q8NGK2 314 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM170AQ8WVE7 144 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 RNF2Q99496 336 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 C20orf24Q9BUV8 137 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
HSPG2-212ENST00000493940 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
HSPG2-212ENST00000493940 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 K7EMT4 169 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 CHEK1O14757 476 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 IFNA17P01571 189 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 FCGR2BP31994 310 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-212ENST00000493940 ZNF79Q15937 498 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 ZNF124Q15973 351 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 BSXQ3C1V8 233 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 AARDQ4LEZ3 155 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 MCFD2Q8NI22 146 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 OR10C1Q96KK4 312 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
HSPG2-212ENST00000493940 DAZ1Q9NQZ3 744 aaKnown RBP9.37□□□□□ -0.91
HSPG2-212ENST00000493940 TRAV25A0A0B4J276 109 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 LCE6AA0A183 80 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 A0A1B0GU03 582 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TSPAN4O14817 238 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 CYB5BO43169 146 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 NXPH3O95157 252 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM50AO95807 157 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 LYL1P12980 280 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 ERHP84090 104 aaKnown RBP9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM187Q14656 261 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TOMM20LQ6UXN7 152 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
HSPG2-212ENST00000493940 CCDC71LQ8N9Z2 235 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 TXN2Q99757 166 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 V9GYH0 126 aa9.36□□□□□ -0.91
HSPG2-212ENST00000493940 IGHV7-4-1A0A0J9YVY3 117 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 C15orf62A8K5M9 175 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-212ENST00000493940 SURF2Q15527 256 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM268Q5VZI3 342 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 SLC35G3Q8N808 338 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 RBPMSQ93062 196 aaKnown RBP9.35□□□□□ -0.91
HSPG2-212ENST00000493940 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 RHPN1-AS1Q9BWJ2 59 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms