RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 FBLN7Q53RD9 439 aa18.39■□□□□ 0.54
CCDC7-206ENST00000476558 SOHLH1Q5JUK2 328 aa18.39■□□□□ 0.54
CCDC7-206ENST00000476558 SLC16A13Q7RTY0 426 aa18.39■□□□□ 0.54
CCDC7-206ENST00000476558 MRPL41Q8IXM3 137 aaKnown RBP18.39■□□□□ 0.54
CCDC7-206ENST00000476558 IGHV4-61A0A0C4DH41 118 aa18.39■□□□□ 0.53
CCDC7-206ENST00000476558 NBR2O15453 112 aa18.39■□□□□ 0.53
CCDC7-206ENST00000476558 LGALS4P56470 323 aa18.39■□□□□ 0.53
CCDC7-206ENST00000476558 TMPRSS5Q9H3S3 457 aa18.39■□□□□ 0.53
CCDC7-206ENST00000476558 AREGP15514 252 aa18.38■□□□□ 0.53
CCDC7-206ENST00000476558 MMDQ15546 238 aa18.38■□□□□ 0.53
CCDC7-206ENST00000476558 Q8N6K4 173 aa18.38■□□□□ 0.53
CCDC7-206ENST00000476558 VAX2Q9UIW0 290 aa18.38■□□□□ 0.53
CCDC7-206ENST00000476558 REG1AP05451 166 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 SNRNP70P08621 437 aaKnown RBP18.37■□□□□ 0.53
CCDC7-206ENST00000476558 MFAP2P55001 183 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 PAX8Q06710 450 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 RBMS3Q6XE24 437 aaKnown RBP18.37■□□□□ 0.53
CCDC7-206ENST00000476558 CYB561D1Q8N8Q1 229 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.37■□□□□ 0.53
CCDC7-206ENST00000476558 OR2T10Q8NGZ9 312 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 IFNA1P01562 189 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 CD24P25063 80 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 CLEC2AQ6UVW9 174 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 OR2T6Q8NHC8 308 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 SRSF12Q8WXF0 261 aaKnown RBP18.37■□□□□ 0.53
CCDC7-206ENST00000476558 MALSU1Q96EH3 234 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 SRSF8Q9BRL6 282 aaKnown RBP18.37■□□□□ 0.53
CCDC7-206ENST00000476558 ABCA2Q9BZC7 2435 aa18.37■□□□□ 0.53
CCDC7-206ENST00000476558 CRYGCP07315 174 aa18.36■□□□□ 0.53
CCDC7-206ENST00000476558 GNB1P62873 340 aa18.36■□□□□ 0.53
CCDC7-206ENST00000476558 SLC35E3Q7Z769 313 aa18.36■□□□□ 0.53
CCDC7-206ENST00000476558 A0A1W2PPV4 95 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 NUPL2O15504 423 aaKnown RBP18.35■□□□□ 0.53
CCDC7-206ENST00000476558 COX6B1P14854 86 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 OR10J1P30954 320 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 OR1P1Q8NH06 330 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 SLC35E1Q96K37 410 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 TMA7Q9Y2S6 64 aaKnown RBP18.35■□□□□ 0.53
CCDC7-206ENST00000476558 IGHV4-30-2A0A087WSY4 118 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 NDUFS6O75380 124 aaKnown RBP18.35■□□□□ 0.53
CCDC7-206ENST00000476558 STAG3L2P0CL84 134 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 STAG3L3P0CL85 134 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 TAGLN2P37802 199 aaKnown RBP18.35■□□□□ 0.53
CCDC7-206ENST00000476558 PLGLAQ15195 96 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 LPAR2Q9HBW0 351 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 MANBALQ9NQG1 85 aa18.35■□□□□ 0.53
CCDC7-206ENST00000476558 CD81P60033 236 aa18.34■□□□□ 0.53
CCDC7-206ENST00000476558 C5orf64Q2M2E5 130 aa18.34■□□□□ 0.53
CCDC7-206ENST00000476558 FAM90A2PQ658T7 463 aa18.34■□□□□ 0.53
CCDC7-206ENST00000476558 ABHD5Q8WTS1 349 aa18.34■□□□□ 0.53
CCDC7-206ENST00000476558 F11RQ9Y624 299 aaKnown RBP18.34■□□□□ 0.53
CCDC7-206ENST00000476558 PSMB3P49720 205 aa18.33■□□□□ 0.53
CCDC7-206ENST00000476558 MEF2BQ02080 365 aaPredicted RBP18.33■□□□□ 0.53
CCDC7-206ENST00000476558 THAP8Q8NA92 274 aa18.33■□□□□ 0.53
CCDC7-206ENST00000476558 NRGNQ92686 78 aa18.33■□□□□ 0.53
CCDC7-206ENST00000476558 MRPL36Q9P0J6 103 aaKnown RBP18.33■□□□□ 0.53
CCDC7-206ENST00000476558 DMRT1Q9Y5R6 373 aa18.33■□□□□ 0.53
CCDC7-206ENST00000476558 HES1Q14469 280 aa18.33■□□□□ 0.52
CCDC7-206ENST00000476558 AWAT1Q58HT5 328 aa18.33■□□□□ 0.52
CCDC7-206ENST00000476558 TMEM88Q6PEY1 159 aa18.33■□□□□ 0.52
CCDC7-206ENST00000476558 GATAD1Q8WUU5 269 aa18.33■□□□□ 0.52
CCDC7-206ENST00000476558 ACY3Q96HD9 319 aa18.33■□□□□ 0.52
CCDC7-206ENST00000476558 SEPSECSQ9HD40 501 aaKnown RBP18.33■□□□□ 0.52
CCDC7-206ENST00000476558 SPG11Q96JI7 2443 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 IGKV1D-37A0A075B6S9 117 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 CENPVL3A0A0U1RRI6 287 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 SAA4P35542 130 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 RHOBP62745 196 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 C19orf35Q6ZS72 473 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 CBLN2Q8IUK8 224 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 NPIPB3Q92617 1050 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 PERPQ96FX8 193 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 CRYBG3Q68DQ2 2970 aa18.32■□□□□ 0.52
CCDC7-206ENST00000476558 APELAP0DMC3 54 aa18.31■□□□□ 0.52
CCDC7-206ENST00000476558 ETFRF1Q6IPR1 90 aa18.31■□□□□ 0.52
CCDC7-206ENST00000476558 PIP4P2Q8N4L2 257 aa18.31■□□□□ 0.52
CCDC7-206ENST00000476558 LRRK2Q5S007 2527 aa18.31■□□□□ 0.52
CCDC7-206ENST00000476558 A1L4Q6 167 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 C7orf77A4D0Y5 90 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 H3BQ15 152 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 GATA2P23769 480 aaPredicted RBP18.3■□□□□ 0.52
CCDC7-206ENST00000476558 DSCR9P59020 149 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 SPATA31B1PQ5VZV4 182 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 RUSC1-AS1Q66K80 236 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 CYP2G1PQ6ZSU1 146 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 CORTO00230 105 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 NPFFO15130 113 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 CNIH1O95406 144 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 CXorf1O96002 111 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 ARL14EPLP0DKL9 152 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 C19orf24Q9BVV8 132 aa18.3■□□□□ 0.52
CCDC7-206ENST00000476558 PUS1Q9Y606 427 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC7-206ENST00000476558 PSMB11A5LHX3 300 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 CEBPGP53567 150 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 FXYD3Q14802 87 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 ZNF562Q6V9R5 426 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 SPNS3Q6ZMD2 512 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 TMEM116Q8NCL8 245 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 MISP3Q96FF7 219 aa18.29■□□□□ 0.52
CCDC7-206ENST00000476558 SLC25A33Q9BSK2 321 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms