RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 RPS10-NUDT3A0A1W2PQS6 291 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 SSNA1O43805 119 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 SCGB2A1O75556 95 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 PF4P02776 101 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 PRH1P02810 166 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 RNASE2P10153 161 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 RAB11AP62491 216 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 FHL3Q13643 280 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 SPSB3Q6PJ21 355 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 C8orf86Q6ZUL3 223 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 OR10C1Q96KK4 312 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 GSKIPQ9P0R6 139 aa9.77□□□□□ -0.85
SPTLC1-204ENST00000469778 FAM25EA8MYX2 175 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 LINC01619G3V211 115 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 NDUFB8O95169 186 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 IFNA10P01566 189 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 SLC25A4P12235 298 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 SPNP16150 400 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 NPY1RP25929 384 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 GPX4P36969 197 aaPredicted RBP9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 MFAP4P55083 255 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 ASB13Q8WXK3 278 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 RAX2Q96IS3 184 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 SMIM8Q96KF7 97 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 NMES1Q9C002 83 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 DMRT1Q9Y5R6 373 aa9.76□□□□□ -0.85
SPTLC1-204ENST00000469778 MPTX1A8MV57 137 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 I3L2K1 104 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 K7EIM0 57 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 GGCTO75223 188 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 IGHV3-11P01762 117 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 CLEC3BP05452 202 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 PVALBP20472 110 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 NPBWR1P48145 328 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 MFAP2P55001 183 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 SPINK9Q5DT21 86 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-204ENST00000469778 TRAV30A0A087WSZ9 112 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 TSC22D2O75157 780 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 TSPAN15O95858 294 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 MT-CO2P00403 227 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 RLN2P04090 185 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 IL15RAQ13261 267 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 DCUN1D4Q92564 292 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 OR5B12Q96R08 314 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 ALG5Q9Y673 324 aa9.74□□□□□ -0.85
SPTLC1-204ENST00000469778 MBPP02686 304 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 IFNA4P05014 189 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 OPRK1P41145 380 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 POLR2GP62487 172 aaKnown RBP eCLIP9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 KLF5Q13887 457 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 FAM106AQ4KMX7 169 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 ETV3LQ6ZN32 361 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 C19orf35Q6ZS72 473 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 MAGT1Q9H0U3 335 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 MED28Q9H204 178 aa9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
SPTLC1-204ENST00000469778 ANKRD34BA5PLL1 514 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 L7N2F9 121 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 LGALS9O00182 355 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 CCSO14618 274 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 GOSR2O14653 212 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 NUPL2O15504 423 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 NXPH3O95157 252 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 PET100P0DJ07 73 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 CD33P20138 364 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 HOXD3P31249 432 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 ARL3P36405 182 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 INSL3P51460 131 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 VAMP2P63027 116 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 RELQ04864 619 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 RPEL1Q2QD12 228 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 CLEC19AQ6UXS0 136 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 OR4X1Q8NH49 305 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 PINX1Q96BK5 328 aaKnown RBP9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
SPTLC1-204ENST00000469778 IGHV4OR15-8A0A075B7B6 117 aa9.71□□□□□ -0.86
SPTLC1-204ENST00000469778 A0A087WW49 117 aa9.71□□□□□ -0.86
SPTLC1-204ENST00000469778 MFSD2BA6NFX1 497 aa9.71□□□□□ -0.86
SPTLC1-204ENST00000469778 TGOLN2O43493 480 aa9.71□□□□□ -0.86
SPTLC1-204ENST00000469778 SSSCA1O60232 199 aa9.71□□□□□ -0.86
SPTLC1-204ENST00000469778 GNG7O60262 68 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms