RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.04□□□□□ -0.16
CDKN1A-206ENST00000462537 CACNG5Q9UF02 275 aa14.04□□□□□ -0.16
CDKN1A-206ENST00000462537 TMEM56-RWDD3S4R434 201 aa14.04□□□□□ -0.16
CDKN1A-206ENST00000462537 MT-CO2P00403 227 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 CBLN1P23435 193 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 SUB1P53999 127 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 TM4SF20Q53R12 229 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 IL22RA2Q969J5 263 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 GPR146Q96CH1 333 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 ATP6V0BQ99437 205 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 CHRDL1Q9BU40 450 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 TECRQ9NZ01 308 aaKnown RBP14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 UFC1Q9Y3C8 167 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 SELENOKQ9Y6D0 94 aa14.03□□□□□ -0.16
CDKN1A-206ENST00000462537 TMEM213A2RRL7 107 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 I3L2K1 104 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 IGHV3-48P01763 117 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 MFAP4P55083 255 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 SPCS3P61009 180 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 SUPT4H1P63272 117 aaKnown RBP14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 DEFB114Q30KQ6 69 aa14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 ZNF436Q9C0F3 470 aaPredicted RBP14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
CDKN1A-206ENST00000462537 F8W735 103 aaPredicted RBP14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 INS-IGF2F8WCM5 200 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 NXPH3O95157 252 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 FRMD6-AS1P0C7T7 363 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 NHLRC4P0CG21 123 aaPredicted RBP14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 SULT1A3P0DMM9 295 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 SULT1A4P0DMN0 295 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 SRPXP78539 464 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 BAK1Q16611 211 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 GUCA2BQ16661 112 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 LGI3Q8N145 548 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 UXS1Q8NBZ7 420 aa14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 SLC25A21Q9BQT8 299 aaPredicted RBP14.01□□□□□ -0.17
CDKN1A-206ENST00000462537 LINC00854A0A1B0GVQ3 168 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 CEBPZOSA8MTT3 80 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 NDUFA4O00483 81 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 NUPL2O15504 423 aaKnown RBP14□□□□□ -0.17
CDKN1A-206ENST00000462537 IGHV4-30-4P0DP06 118 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 RNASE2P10153 161 aaKnown RBP14□□□□□ -0.17
CDKN1A-206ENST00000462537 VAMP1P23763 118 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
CDKN1A-206ENST00000462537 CD81P60033 236 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 TMEM128Q5BJH2 165 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 Q8N1Y9 231 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 OR52E5Q8NH55 327 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 TMEM190Q8WZ59 177 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 TXN2Q99757 166 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 C20orf24Q9BUV8 137 aa14□□□□□ -0.17
CDKN1A-206ENST00000462537 HEYLQ9NQ87 328 aaPredicted RBP14□□□□□ -0.17
CDKN1A-206ENST00000462537 COL7A1Q02388 2944 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 A0A0B4J2A0 478 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 CORTO00230 105 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 GNG7O60262 68 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 ADMP35318 185 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 CCR6P51684 374 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 RELQ04864 619 aaPredicted RBP13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 RBMS2Q15434 407 aaKnown RBP13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 AARDQ4LEZ3 155 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 BTNL8Q6UX41 500 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 LYZL2Q7Z4W2 148 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 MARC2Q969Z3 335 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 WDR89Q96FK6 387 aaPredicted RBP13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 MRPL27Q9P0M9 148 aaKnown RBP13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 MLXQ9UH92 298 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 SHPKQ9UHJ6 478 aa13.99□□□□□ -0.17
CDKN1A-206ENST00000462537 NAP1L6A6NFF2 107 aa13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 CTSGP08311 255 aa13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 CENPSQ8N2Z9 138 aa13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 DUSP18Q8NEJ0 188 aa13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 DAZ1Q9NQZ3 744 aaKnown RBP13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 CACFD1Q9UGQ2 172 aa13.98□□□□□ -0.17
CDKN1A-206ENST00000462537 PIGBOS1A0A0B4J2F0 54 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 ZNF785A8K8V0 405 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 CENPXA8MT69 81 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 ZNF207O43670 478 aaKnown RBP13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 YIF1AO95070 293 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 FCGR2BP31994 310 aaPredicted RBP13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 OPRK1P41145 380 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 HTR2BP41595 481 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 NPBWR1P48145 328 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 SMCO1Q147U7 214 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 TMEM61Q8N0U2 210 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 SDHCQ99643 169 aaPredicted RBP13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 TUBA4BQ9H853 241 aa13.97□□□□□ -0.17
CDKN1A-206ENST00000462537 SCAF4O95104 1147 aaKnown RBP13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 C8orf88P0DMB2 117 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 PPP1R1AQ13522 171 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 NMSQ5H8A3 153 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 RBPMS2Q6ZRY4 209 aaKnown RBP13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 SBSPONQ8IVN8 264 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 OR1S1Q8NH92 325 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 HIPK2Q9H2X6 1198 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 U3KQK5 164 aa13.96□□□□□ -0.17
CDKN1A-206ENST00000462537 IL7P13232 177 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms