RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SFT2D2O95562 160 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 RNASE2P10153 161 aaKnown RBP12.05□□□□□ -0.48
ERCC3-206ENST00000462306 VAMP1P23763 118 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 HOXA1P49639 335 aaPredicted RBP12.05□□□□□ -0.48
ERCC3-206ENST00000462306 PPP1R1AQ13522 171 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 MISP3Q96FF7 219 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 FLVCR2Q9UPI3 526 aa12.05□□□□□ -0.48
ERCC3-206ENST00000462306 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 CENPXA8MT69 81 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 TGOLN2O43493 480 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 MT-CO2P00403 227 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 SNCAP37840 140 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 UBE2MP61081 183 aaKnown RBP12.04□□□□□ -0.48
ERCC3-206ENST00000462306 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 DEFB121Q5J5C9 76 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 PLET1Q6UQ28 207 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 BSCL2Q96G97 398 aaPredicted RBP12.04□□□□□ -0.48
ERCC3-206ENST00000462306 CCDC32Q9BV29 185 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 PTTG2Q9NZH5 202 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
ERCC3-206ENST00000462306 SORL1Q92673 2214 aa12.04□□□□□ -0.48
ERCC3-206ENST00000462306 DUXBA0A1W2PPF3 345 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 C2orf70A6NJV1 201 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 EDN2P20800 178 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 ADMP35318 185 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 SMCO1Q147U7 214 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 CHRDL1Q9BU40 450 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 ZNF436Q9C0F3 470 aaPredicted RBP12.03□□□□□ -0.48
ERCC3-206ENST00000462306 ENY2Q9NPA8 101 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 BATF3Q9NR55 127 aa12.03□□□□□ -0.48
ERCC3-206ENST00000462306 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 A8MWP6 167 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 LYRM1O43325 122 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 LY86O95711 162 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 CTSGP08311 255 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 GP9P14770 177 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 FCGR2BP31994 310 aaPredicted RBP12.02□□□□□ -0.49
ERCC3-206ENST00000462306 SPSB3Q6PJ21 355 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 S100ZQ8WXG8 99 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
ERCC3-206ENST00000462306 ZNF414Q96IQ9 312 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 HSPB7Q9UBY9 170 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 CACFD1Q9UGQ2 172 aa12.02□□□□□ -0.49
ERCC3-206ENST00000462306 A0A1B0GU03 582 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 C9orf170A2RU37 121 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 NXPH3O95157 252 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 IGHV3-48P01763 117 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 FOLR2P14207 255 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
ERCC3-206ENST00000462306 MFAP4P55083 255 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 Q56UQ5 140 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 UBAC2Q8NBM4 344 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 TXN2Q99757 166 aa12.01□□□□□ -0.49
ERCC3-206ENST00000462306 HEYLQ9NQ87 328 aaPredicted RBP12.01□□□□□ -0.49
ERCC3-206ENST00000462306 IZUMO1RA6ND01 250 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 PITX3O75364 302 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 OR4E1P0C645 316 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 CBLN1P23435 193 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 HTR2BP41595 481 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
ERCC3-206ENST00000462306 TM4SF20Q53R12 229 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 TMEM170AQ8WVE7 144 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
ERCC3-206ENST00000462306 GAR1Q9NY12 217 aaKnown RBP12□□□□□ -0.49
ERCC3-206ENST00000462306 TMED3Q9Y3Q3 217 aa12□□□□□ -0.49
ERCC3-206ENST00000462306 CORTO00230 105 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 SLC25A6P12236 298 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 ANXA7P20073 488 aaKnown RBP11.99□□□□□ -0.49
ERCC3-206ENST00000462306 DHRS2Q13268 280 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 DEFB114Q30KQ6 69 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 C2orf83Q53S99 150 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 OR2K2Q8NGT1 345 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 TMEM190Q8WZ59 177 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 RBKSQ9H477 322 aa11.99□□□□□ -0.49
ERCC3-206ENST00000462306 NDUFA4O00483 81 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 HOXB5P09067 269 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 C8orf88P0DMB2 117 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
ERCC3-206ENST00000462306 MLANAQ16655 118 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 CD300EQ496F6 205 aaPredicted RBP11.98□□□□□ -0.49
ERCC3-206ENST00000462306 GGNBP1Q5YKI7 109 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 LCN12Q6JVE5 192 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 Q8N1Y9 231 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 DUSP18Q8NEJ0 188 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms