RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TFPI2P48307 235 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 FAM90A2PQ658T7 463 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 SNX29P2Q8IUI4 249 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 GATAD1Q8WUU5 269 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 MRGPRFQ96AM1 343 aa15.29■□□□□ 0.04
CPNE1-219ENST00000440240 PINX1Q96BK5 328 aaKnown RBP15.29■□□□□ 0.04
CPNE1-219ENST00000440240 IGHV3-49A0A0A0MS15 119 aa15.28■□□□□ 0.04
CPNE1-219ENST00000440240 NPBWR1P48145 328 aa15.28■□□□□ 0.04
CPNE1-219ENST00000440240 IGKV3-7A0A075B6H7 116 aa15.27■□□□□ 0.04
CPNE1-219ENST00000440240 IGHV3-48P01763 117 aa15.27■□□□□ 0.04
CPNE1-219ENST00000440240 SNCAP37840 140 aa15.27■□□□□ 0.04
CPNE1-219ENST00000440240 DUSP18Q8NEJ0 188 aa15.27■□□□□ 0.04
CPNE1-219ENST00000440240 RARRES2Q99969 163 aa15.27■□□□□ 0.04
CPNE1-219ENST00000440240 TNFAIP8O95379 198 aa15.26■□□□□ 0.03
CPNE1-219ENST00000440240 TOMM20LQ6UXN7 152 aa15.26■□□□□ 0.03
CPNE1-219ENST00000440240 TCF24Q7RTU0 167 aa15.26■□□□□ 0.03
CPNE1-219ENST00000440240 GBGT1Q8N5D6 347 aa15.26■□□□□ 0.03
CPNE1-219ENST00000440240 PHLDA1Q8WV24 401 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-219ENST00000440240 ZNF486Q96H40 463 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-219ENST00000440240 IGHV3OR16-13A0A075B7E8 117 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 IGHV3-74A0A0B4J1X5 117 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 ATG12O94817 140 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 PGAM2P15259 253 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 ELK1P19419 428 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 RND3P61587 244 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 ZNF124Q15973 351 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 VSIRQ9H7M9 311 aa15.25■□□□□ 0.03
CPNE1-219ENST00000440240 INS-IGF2F8WCM5 200 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 DNASE2O00115 360 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-219ENST00000440240 ST8SIA3O43173 380 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 DFFBO76075 338 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 SUB1P53999 127 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPNE1-219ENST00000440240 NCS1P62166 190 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 ZNF600Q6ZNG1 722 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 FUNDC2Q9BWH2 189 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 MFFQ9GZY8 342 aa15.24■□□□□ 0.03
CPNE1-219ENST00000440240 TRAV2A0A0B4J234 112 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 M0QYG6 137 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 CORTO00230 105 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 HPGDSO60760 199 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 IFNA17P01571 189 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 RORCP51449 518 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 VBP1P61758 197 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 RNASE10Q5GAN6 216 aaKnown RBP15.23■□□□□ 0.03
CPNE1-219ENST00000440240 ARRDC1Q8N5I2 433 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 SLC35G3Q8N808 338 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 OR11H2Q8NH07 326 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 ST8SIA2Q92186 375 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 PDCD10Q9BUL8 212 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 TMEM231Q9H6L2 316 aa15.23■□□□□ 0.03
CPNE1-219ENST00000440240 PUS1Q9Y606 427 aaKnown RBP eCLIP15.23■□□□□ 0.03
CPNE1-219ENST00000440240 A0A0B4J293 547 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 TMEM50AO95807 157 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 AKR1C2P52895 323 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 PIGPP57054 158 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 RPL11P62913 178 aaKnown RBP15.22■□□□□ 0.03
CPNE1-219ENST00000440240 IZUMO4Q1ZYL8 232 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 SPINK9Q5DT21 86 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 LGALS9CQ6DKI2 356 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 PVRIGQ6DKI7 326 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 MZT2AQ6P582 158 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 C11orf45Q8TAV5 145 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 MS4A6AQ9H2W1 248 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 KLK11Q9UBX7 282 aa15.22■□□□□ 0.03
CPNE1-219ENST00000440240 C3orf85A0A1B0GTC6 90 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 A0A1W2PS18 150 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 IGKV1-5P01602 117 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 APOHP02749 345 aaPredicted RBP15.21■□□□□ 0.03
CPNE1-219ENST00000440240 IFNA4P05014 189 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 PI3P19957 117 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 LHFPL1Q86WI0 220 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 TP53RKQ96S44 253 aa15.21■□□□□ 0.03
CPNE1-219ENST00000440240 C11orf68Q9H3H3 251 aaKnown RBP15.21■□□□□ 0.03
CPNE1-219ENST00000440240 FAM25AB3EWG3 89 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 FAM25CB3EWG5 89 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 FAM25GB3EWG6 89 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 CA1P00915 261 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-219ENST00000440240 P0C879 139 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 TBPP20226 339 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 NPPCP23582 126 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 DEFB131AP59861 70 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 TMEM187Q14656 261 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
CPNE1-219ENST00000440240 LILRB2Q8N423 598 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 ZFAND1Q8TCF1 268 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 ZFAND3Q9H8U3 227 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 ENY2Q9NPA8 101 aa15.2■□□□□ 0.02
CPNE1-219ENST00000440240 IGHV3-66A0A0C4DH42 116 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 CD3DP04234 171 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 ETV6P41212 452 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 AP3S1Q92572 193 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 RRNAD1Q96FB5 475 aaKnown RBP15.19■□□□□ 0.02
CPNE1-219ENST00000440240 COPZ2Q9P299 210 aa15.19■□□□□ 0.02
CPNE1-219ENST00000440240 KMT2AQ03164 3969 aa15.18■□□□□ 0.02
CPNE1-219ENST00000440240 A0A1B0GU03 582 aa15.18■□□□□ 0.02
CPNE1-219ENST00000440240 B3GALNT1O75752 331 aa15.18■□□□□ 0.02
CPNE1-219ENST00000440240 RNASE2P10153 161 aaKnown RBP15.18■□□□□ 0.02
CPNE1-219ENST00000440240 RPL5P46777 297 aaKnown RBP15.18■□□□□ 0.02
CPNE1-219ENST00000440240 NANOS2P60321 138 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms