RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TRAV9-1A0A075B6T8 112 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 FUOMA2VDF0 154 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 HMSDA8MTL9 139 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 PDE6DO43924 150 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 IGKV1-5P01602 117 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 CYBAP13498 195 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 CRYBA4P53673 196 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 FAM27BQ5VT28 67 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 Q8NDZ9 215 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 OR51A2Q8NGJ7 313 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 BTF3L4Q96K17 158 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 KIFC1Q9BW19 673 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 DDA1Q9BW61 102 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 CHST6Q9GZX3 395 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 RNASE7Q9H1E1 156 aaKnown RBP2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 IDI2-AS1Q9NZ38 188 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 STRCP1A6NGW2 1772 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 PIK3C2GO75747 1445 aa2.08□□□□□ -2.08
HMGB3P31-201ENST00000413333 SYNMO15061 1565 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 NOTCH2Q04721 2471 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 A0A1B0GV72 72 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 IRGMA1A4Y4 181 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 PSMD8P48556 350 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 RAB4BP61018 213 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 HIST1H3AP68431 136 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 H3F3AP84243 136 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 KISS1Q15726 138 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 IAH1Q2TAA2 248 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 KIAA2026Q5HYC2 2103 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 TRIQKQ629K1 86 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 PHF13Q86YI8 300 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 DYNAPQ8N1N2 210 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 CT55Q8WUE5 264 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 TOMM6Q96B49 74 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 CCDC90BQ9GZT6 254 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 PCBD2Q9H0N5 130 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 BOLA2Q9H3K6 86 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 ARMC1Q9NVT9 282 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 HIVEP2P31629 2446 aa2.07□□□□□ -2.08
HMGB3P31-201ENST00000413333 A0A0D9SEW6 157 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 FAM159BA6NKW6 160 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 TRAPPC2LH3BP13 241 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 TRGC1P0CF51 173 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 AQP4P55087 323 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 DEFB103AP81534 67 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 TFAMQ00059 246 aaKnown RBP2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 LIN52Q52LA3 116 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 IBA57Q5T440 356 aaKnown RBP2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 BPIFA4PQ86YQ2 179 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 GDPD1Q8N9F7 314 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 OR13C4Q8NGS5 318 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 PHB2Q99623 299 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 NMNAT1Q9HAN9 279 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 UQCC1Q9NVA1 299 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 FAM32AQ9Y421 112 aaKnown RBP2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 MYH2Q9UKX2 1941 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 CPDO75976 1380 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 ICE1Q9Y2F5 2266 aa2.06□□□□□ -2.08
HMGB3P31-201ENST00000413333 GBF1Q92538 1859 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 hCG_1818297A0A087WSY0 165 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 A8MT66 165 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 ZNF705FA8MVS1 300 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 OVOL1O14753 267 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 S1PR2O95136 353 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 NBEAP1P0C6P0 100 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 IFI30P13284 250 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 DEFA3P59666 94 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 SUPT4H1P63272 117 aaKnown RBP2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 RELAQ04206 551 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 TMEM155Q4W5P6 130 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 SPANXN3Q5MJ09 141 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 TMEM86AQ8N2M4 240 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 DNAJC9Q8WXX5 260 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 H1FXQ92522 213 aaKnown RBP2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 ENY2Q9NPA8 101 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 NDUFAF1Q9Y375 327 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 ROBO3Q96MS0 1386 aa2.05□□□□□ -2.08
HMGB3P31-201ENST00000413333 ORC5O43913 435 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 OR7C1O76099 320 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 IFNA21P01568 189 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 IGKV1-16P04430 117 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 HMGN1P05114 100 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 RBP1P09455 135 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 OOSP2Q86WS3 158 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 CLVS1Q8IUQ0 354 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 OR52L1Q8NGH7 329 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 SPACA4Q8TDM5 124 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 RASSF5Q8WWW0 418 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 GINS4Q9BRT9 223 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 BATF3Q9NR55 127 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 SCN10AQ9Y5Y9 1956 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 NCOA3Q9Y6Q9 1424 aa2.04□□□□□ -2.08
HMGB3P31-201ENST00000413333 TRBV10-2A0A0K0K1G8 114 aa2.03□□□□□ -2.08
HMGB3P31-201ENST00000413333 MEIS3P1A6NDR6 274 aa2.03□□□□□ -2.08
HMGB3P31-201ENST00000413333 IFNA1P01562 189 aa2.03□□□□□ -2.08
HMGB3P31-201ENST00000413333 IFNA10P01566 189 aa2.03□□□□□ -2.08
HMGB3P31-201ENST00000413333 SERPINE1P05121 402 aa2.03□□□□□ -2.08
HMGB3P31-201ENST00000413333 SMIM17P0DL12 118 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms