RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 MISP3Q96FF7 219 aa13.72□□□□□ -0.21
TOM1-204ENST00000411850 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
TOM1-204ENST00000411850 GNB1LQ9BYB4 327 aa13.72□□□□□ -0.21
TOM1-204ENST00000411850 MRPL32Q9BYC8 188 aaKnown RBP13.72□□□□□ -0.21
TOM1-204ENST00000411850 SVILO95425 2214 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 DLL1O00548 723 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 FCN1O00602 326 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 CCL8P80075 99 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 Q0VG73 95 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 TIGITQ495A1 244 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 TMEM108Q6UXF1 575 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 RNF2Q99496 336 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
TOM1-204ENST00000411850 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
TOM1-204ENST00000411850 PSMB11A5LHX3 300 aa13.71□□□□□ -0.22
TOM1-204ENST00000411850 SNRPCP09234 159 aaKnown RBP13.71□□□□□ -0.22
TOM1-204ENST00000411850 IER3P46695 156 aa13.71□□□□□ -0.22
TOM1-204ENST00000411850 RANP62826 216 aaKnown RBP13.71□□□□□ -0.22
TOM1-204ENST00000411850 RPL8P62917 257 aaKnown RBP13.71□□□□□ -0.22
TOM1-204ENST00000411850 ERHP84090 104 aaKnown RBP13.71□□□□□ -0.22
TOM1-204ENST00000411850 RPL19P84098 196 aaKnown RBP13.71□□□□□ -0.22
TOM1-204ENST00000411850 OR8I2Q8N0Y5 310 aa13.71□□□□□ -0.22
TOM1-204ENST00000411850 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.22
TOM1-204ENST00000411850 KIR2DL5BA0A0G2JN68 375 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 KIR2DL5BA0A0G2JPC4 375 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 ISLRO14498 428 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 CX3CL1P78423 397 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 KIR2DL5AQ8N109 375 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 OR4A5Q8NH83 315 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 ZNF714Q96N38 554 aa13.7□□□□□ -0.22
TOM1-204ENST00000411850 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 SNURFLB1AK76 121 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 USF1P22415 310 aaPredicted RBP13.69□□□□□ -0.22
TOM1-204ENST00000411850 PPOXP50336 477 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 FOXC1Q12948 553 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 TMEM167AQ8TBQ9 72 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 SERF1AO75920 110 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 MT-ND6P03923 174 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 SUMO1P63165 101 aaKnown RBP13.69□□□□□ -0.22
TOM1-204ENST00000411850 COX19Q49B96 90 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 TMEM200BQ69YZ2 307 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 FAM71F2Q6NXP2 309 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 WDR73Q6P4I2 378 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 FLYWCH2Q96CP2 140 aaKnown RBP13.69□□□□□ -0.22
TOM1-204ENST00000411850 FAM167A-AS1Q96KT0 104 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 IGF2BP2-AS1Q96M15 143 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 BOD1L1Q8NFC6 3051 aa13.69□□□□□ -0.22
TOM1-204ENST00000411850 A0A1W2PN81 502 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 FRMD6-AS1P0C7T7 363 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 CCL3L1P16619 93 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 CHRNB4P30926 498 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 ADIPOQQ15848 244 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 Q6ZWC4 215 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 ST6GALNAC3Q8NDV1 305 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 DNAJC4Q9NNZ3 241 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 LAMA5O15230 3695 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 MGAQ8IWI9 3026 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 TNCP24821 2201 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
TOM1-204ENST00000411850 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 VSTM2AQ8TAG5 236 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 SLC25A2Q9BXI2 301 aa13.68□□□□□ -0.22
TOM1-204ENST00000411850 RNASE7Q9H1E1 156 aaKnown RBP13.68□□□□□ -0.22
TOM1-204ENST00000411850 FCN3O75636 299 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 PDPNQ86YL7 162 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 OR2T6Q8NHC8 308 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 C16orf97H3BN30 126 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 RNF224P0DH78 156 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
TOM1-204ENST00000411850 BAGE3Q86Y29 109 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 BAGE2Q86Y30 109 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 LINC00311Q8N616 119 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 TBX15Q96SF7 602 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 SCNM1Q9BWG6 230 aa13.67□□□□□ -0.22
TOM1-204ENST00000411850 DPRXA6NFQ7 191 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 E7EUB6 86 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 MORN5Q5VZ52 161 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 SPACA3Q8IXA5 215 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 TMEM186Q96B77 213 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 ABHD17AQ96GS6 310 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 PPIAL4EA0A075B759 164 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 CGB1A6NKQ9 187 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
TOM1-204ENST00000411850 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
TOM1-204ENST00000411850 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
TOM1-204ENST00000411850 PPIAL4FP0DN26 164 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 UBE2L3P68036 154 aaKnown RBP13.66□□□□□ -0.22
TOM1-204ENST00000411850 TMEM136Q6ZRR5 245 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 PPIAL4AQ9Y536 164 aa13.66□□□□□ -0.22
TOM1-204ENST00000411850 PLCE1Q9P212 2302 aa13.65□□□□□ -0.22
TOM1-204ENST00000411850 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
TOM1-204ENST00000411850 TMEM178BH3BS89 294 aa13.65□□□□□ -0.22
TOM1-204ENST00000411850 TNFRSF13BO14836 293 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms