RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CFAP46Q8IYW2 2715 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 APELAP0DMC3 54 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 GATA2P23769 480 aaPredicted RBP16.59■□□□□ 0.25
USP39-203ENST00000409470 SPATA31B1PQ5VZV4 182 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 CST9LP1Q5W188 147 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 NANPQ8TBE9 248 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 BPESC1Q9GZL8 116 aa16.59■□□□□ 0.25
USP39-203ENST00000409470 OVOL3O00110 214 aa16.58■□□□□ 0.25
USP39-203ENST00000409470 FAM78BQ5VT40 261 aa16.58■□□□□ 0.25
USP39-203ENST00000409470 HIST1H2BAQ96A08 127 aa16.58■□□□□ 0.25
USP39-203ENST00000409470 FNDC4Q9H6D8 234 aaPredicted RBP16.58■□□□□ 0.25
USP39-203ENST00000409470 NAV3Q8IVL0 2385 aa16.58■□□□□ 0.25
USP39-203ENST00000409470 TACC2O95359 2948 aa16.58■□□□□ 0.25
USP39-203ENST00000409470 A0A087WWC5 75 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 MT-CO2P00403 227 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 CRYBA1P05813 215 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 AREGP15514 252 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 MMDQ15546 238 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 SDF2L1Q9HCN8 221 aa16.58■□□□□ 0.24
USP39-203ENST00000409470 B4DEV8 164 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 NDUFS6O75380 124 aaKnown RBP16.57■□□□□ 0.24
USP39-203ENST00000409470 IGHV3-48P01763 117 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 MT-ND4LP03901 98 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 FAM24BQ8N5W8 94 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 CFHR4Q92496 578 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 MISP3Q96FF7 219 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 CACNA1BQ00975 2339 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 SSX2Q16385 188 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 IGFBPL1Q8WX77 278 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 NPIPB3Q92617 1050 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 PARLQ9H300 379 aa16.57■□□□□ 0.24
USP39-203ENST00000409470 FCN1O00602 326 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 GCHFRP30047 84 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 LGALS4P56470 323 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 HES1Q14469 280 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 CYP2G1PQ6ZSU1 146 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 ZNF114Q8NC26 417 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 NAT8Q9UHE5 227 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 FUT9Q9Y231 359 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 AKAP6Q13023 2319 aa16.56■□□□□ 0.24
USP39-203ENST00000409470 IGHV2-70DA0A0C4DH43 119 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 PDE6DO43924 150 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 MOSP00540 346 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 HOXB4P17483 251 aaPredicted RBP16.55■□□□□ 0.24
USP39-203ENST00000409470 CD24P25063 80 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 ATP5G3P48201 142 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 TMEM241Q24JQ0 296 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 ETFRF1Q6IPR1 90 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 MIR17HGQ75NE6 70 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 SRSF12Q8WXF0 261 aaKnown RBP16.55■□□□□ 0.24
USP39-203ENST00000409470 NBR2O15453 112 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 FOXH1O75593 365 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 GOSR1O95249 250 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 CNIH1O95406 144 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 IGHV4-39P01824 125 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 SSBP2P81877 361 aaPredicted RBP16.55■□□□□ 0.24
USP39-203ENST00000409470 FLI1Q01543 452 aaPredicted RBP16.55■□□□□ 0.24
USP39-203ENST00000409470 KIAA0141Q14154 515 aaPredicted RBP16.55■□□□□ 0.24
USP39-203ENST00000409470 SIRPDQ9H106 197 aa16.55■□□□□ 0.24
USP39-203ENST00000409470 TEX22C9J3V5 150 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 PDLIM4P50479 330 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 LMO4P61968 165 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 PAX2Q02962 417 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 HABP2Q14520 560 aaPredicted RBP16.54■□□□□ 0.24
USP39-203ENST00000409470 CCDC144NLQ6NUI1 221 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 C19orf24Q9BVV8 132 aa16.54■□□□□ 0.24
USP39-203ENST00000409470 TOX4O94842 621 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 RND2P52198 227 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 MFAP2P55001 183 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 ADIRFQ15847 76 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 C19orf35Q6ZS72 473 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 OR1P1Q8NH06 330 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 EAF1Q96JC9 268 aaPredicted RBP16.53■□□□□ 0.24
USP39-203ENST00000409470 CCL19Q99731 98 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 SPTAN1Q13813 2472 aaKnown RBP16.53■□□□□ 0.24
USP39-203ENST00000409470 MINOS1Q5TGZ0 78 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 PVRIGQ6DKI7 326 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 TXNDC17Q9BRA2 123 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 TECRQ9NZ01 308 aaKnown RBP16.53■□□□□ 0.24
USP39-203ENST00000409470 MRPL36Q9P0J6 103 aaKnown RBP16.53■□□□□ 0.24
USP39-203ENST00000409470 MINOS1-NBL1R4GNA1 71 aa16.53■□□□□ 0.24
USP39-203ENST00000409470 TCRBV4S1A1TA0A5B7 111 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 F6UZH7 168 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 CLN5O75503 358 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 PRB1P04280 392 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 FOLR2P14207 255 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 THAP8Q8NA92 274 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 OR51G1Q8NGK1 321 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 OR2T10Q8NGZ9 312 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 C22orf15Q8WYQ4 148 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 SLC25A33Q9BSK2 321 aa16.52■□□□□ 0.24
USP39-203ENST00000409470 F11RQ9Y624 299 aaKnown RBP16.52■□□□□ 0.24
USP39-203ENST00000409470 OOSP1A8MZH6 123 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 CORTO00230 105 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 OR5G3P0C626 314 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 RAB5AP20339 215 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 RNF212Q495C1 297 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 NPBQ8NG41 125 aa16.52■□□□□ 0.23
USP39-203ENST00000409470 CXorf65A6NEN9 183 aa16.51■□□□□ 0.23
USP39-203ENST00000409470 RNF224P0DH78 156 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms