RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ITGB1BP1O14713 200 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 PLA2G10O15496 165 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 FABP7O15540 132 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 LYRM1O43325 122 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 LY6HO94772 140 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 RAB3DO95716 219 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 PTTG1O95997 202 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV2-5P01817 119 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHG4P01861 327 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 RBP4P02753 201 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CD3DP04234 171 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF735P0CB33 412 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 RPS2P15880 293 aaKnown RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 RCC1P18754 421 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HNRNPA3P51991 378 aaKnown RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HLA-DRB3P79483 266 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 AESQ08117 197 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 MADCAM1Q13477 382 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CDK10Q15131 360 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HMGN3Q15651 99 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 Q3ZCU0 254 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CHRFAM7AQ494W8 412 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 RNASE10Q5GAN6 216 aaKnown RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 KLF17Q5JT82 389 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 LY6G6FQ5SQ64 297 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 AVPI1Q5T686 147 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 LYPD2Q6UXB3 125 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 FAM216BQ8N7L0 139 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CCDC71LQ8N9Z2 235 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUSP18Q8NEJ0 188 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR52M1Q8NGK5 317 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR5H2Q8NGV7 314 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 PRRT1Q99946 306 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 SLC25A21Q9BQT8 299 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HDHD3Q9BSH5 251 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 BPESC1Q9GZL8 116 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TAF9BQ9HBM6 251 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 HRASLSQ9HDD0 168 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 NECAP2Q9NVZ3 263 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 KCNIP1Q9NZI2 227 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 CLN8Q9UBY8 286 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF230Q9UIE0 474 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 SCP2D1Q9UJQ7 156 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TRAPPC2LQ9UL33 140 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TBC1D24Q9ULP9 559 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 TNCP24821 2201 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
HMGB3P19-201ENST00000403971 PDZD2O15018 2839 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 VPS13CQ709C8 3753 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 KBTBD11-OT1A0A1B0GTJ5 212 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 FAM240BA0A1B0GVZ2 78 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 A0A1B0GW55 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 PSMB11A5LHX3 300 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 MEIS3P1A6NDR6 274 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 C12orf77C9JDV5 145 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 YPEL1O60688 119 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 FOXH1O75593 365 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 FCN3O75636 299 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OPN1MWP04001 364 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 IFNA6P05013 189 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 SCTP09683 121 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L2P0CJ85 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L3P0CJ86 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L5P0CJ88 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L6P0CJ89 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L7P0CJ90 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF728P0DKX0 622 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OPN1MW2P0DN77 364 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OPN1MW3P0DN78 364 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR5H8P0DN80 308 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 AZU1P20160 251 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 HLA-DMAP28067 261 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 SLC6A1P30531 599 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 BTCP35070 178 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 HRH1P35367 487 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 GLP1RP43220 463 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DLX6P56179 175 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 EDDM3BP56851 147 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ARPC4P59998 168 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 RPL31P62899 125 aaKnown RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 LOXL1Q08397 574 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 EDDM3AQ14507 147 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OXA1LQ15070 435 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 SURF2Q15527 256 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 CLEC12BQ2HXU8 276 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 RGS21Q2M5E4 152 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF660Q6AZW8 331 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR52W1Q6IF63 320 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4L9Q6RFH8 374 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 HEPN1Q6WQI6 88 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 TCF23Q7RTU1 214 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 LHFPL1Q86WI0 220 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 C8orf31Q8N9H6 132 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 C20orf203Q8NBC4 194 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 LY6G5BQ8NDX9 201 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR4C16Q8NGL9 310 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 TERB2Q8NHR7 220 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 CLDND2Q8NHS1 167 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ENKURQ8TC29 256 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms