RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 DTD1Q8TEA8 209 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 RCC1LQ96I51 464 aaKnown RBP19.62■□□□□ 0.73
U2AF1-203ENST00000398137 RAX2Q96IS3 184 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 MAGT1Q9H0U3 335 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 S4R3C0 116 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 C5orf51A6NDU8 294 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 FAM90A26D6RGX4 464 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 RNASE2P10153 161 aaKnown RBP19.61■□□□□ 0.73
U2AF1-203ENST00000398137 RUNX1Q01196 453 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 OR4D5Q8NGN0 318 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 OR1L6Q8NGR2 347 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 MISP3Q96FF7 219 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 GSKIPQ9P0R6 139 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 ALG5Q9Y673 324 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 DNAH9Q9NYC9 4486 aa19.61■□□□□ 0.73
U2AF1-203ENST00000398137 C7orf66A4D0T2 115 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 MFSD2BA6NFX1 497 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 K7EIL1 84 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 IAPPP10997 89 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 OXA1LQ15070 435 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 HIPK2Q9H2X6 1198 aa19.6■□□□□ 0.73
U2AF1-203ENST00000398137 ANKRD34BA5PLL1 514 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 GOSR2O14653 212 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 SSNA1O43805 119 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 SCGB1D2O95969 90 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 IGHV3-23P01764 117 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 ZNF343Q6P1L6 599 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 SLC24A4Q8NFF2 622 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 THYN1Q9P016 225 aa19.59■□□□□ 0.73
U2AF1-203ENST00000398137 IGHV3-21A0A0B4J1V1 117 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 CCL24O00175 119 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 MED6O75586 246 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 HOXD3P31249 432 aaPredicted RBP19.58■□□□□ 0.72
U2AF1-203ENST00000398137 HTR2BP41595 481 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 NKX2-1P43699 371 aaPredicted RBP19.58■□□□□ 0.72
U2AF1-203ENST00000398137 EGFEM1PQ0D2K5 195 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 BSXQ3C1V8 233 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 GSG1LQ6UXU4 331 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 OR11H1Q8NG94 326 aa19.58■□□□□ 0.72
U2AF1-203ENST00000398137 IGHV4OR15-8A0A075B7B6 117 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 A0A087WW49 117 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 SYNGR2O43760 224 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 TRBV12-3P01733 135 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 SUB1P53999 127 aaKnown RBP eCLIP19.57■□□□□ 0.72
U2AF1-203ENST00000398137 ID3Q02535 119 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 OR1N2Q8NGR9 330 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 EEF1AKMT3Q96AZ1 226 aa19.57■□□□□ 0.72
U2AF1-203ENST00000398137 WI2-2373I1.2A0A1W2PRP0 233 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 K7EIM0 57 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 SIX6O95475 246 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 NPY1RP25929 384 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 MYCNOSP40205 109 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 POLR2GP62487 172 aaKnown RBP eCLIP19.56■□□□□ 0.72
U2AF1-203ENST00000398137 PINX1Q96BK5 328 aaKnown RBP19.56■□□□□ 0.72
U2AF1-203ENST00000398137 CXorf58Q96LI9 332 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 C2orf50Q96LR7 162 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 CCDC140Q96MF4 163 aa19.56■□□□□ 0.72
U2AF1-203ENST00000398137 WRBO00258 174 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 SSSCA1O60232 199 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 IFNA10P01566 189 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 ZNF616Q08AN1 781 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 FHL3Q13643 280 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 TMEM170AQ8WVE7 144 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 DPF1Q92782 380 aa19.55■□□□□ 0.72
U2AF1-203ENST00000398137 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.54■□□□□ 0.72
U2AF1-203ENST00000398137 LINC01619G3V211 115 aa19.54■□□□□ 0.72
U2AF1-203ENST00000398137 MBPP02686 304 aaPredicted RBP19.54■□□□□ 0.72
U2AF1-203ENST00000398137 HSPB1P04792 205 aaKnown RBP19.54■□□□□ 0.72
U2AF1-203ENST00000398137 C2orf83Q53S99 150 aa19.54■□□□□ 0.72
U2AF1-203ENST00000398137 PVRIGQ6DKI7 326 aa19.54■□□□□ 0.72
U2AF1-203ENST00000398137 ZNF502Q8TBZ5 544 aa19.54■□□□□ 0.72
U2AF1-203ENST00000398137 VN1R17PQ8TDU5 208 aa19.54■□□□□ 0.72
U2AF1-203ENST00000398137 PEF1Q9UBV8 284 aaKnown RBP19.54■□□□□ 0.72
U2AF1-203ENST00000398137 I3L2K1 104 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 MT-CO2P00403 227 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 IGHV3-48P01763 117 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 CLEC19AQ6UXS0 136 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 SCARB1Q8WTV0 552 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 CIB3Q96Q77 187 aaPredicted RBP19.53■□□□□ 0.72
U2AF1-203ENST00000398137 MGAT4CQ9UBM8 478 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 U3KQ87 197 aa19.53■□□□□ 0.72
U2AF1-203ENST00000398137 TRBV7-1A0A0A6YYK4 115 aa19.52■□□□□ 0.72
U2AF1-203ENST00000398137 CORTO00230 105 aa19.52■□□□□ 0.72
U2AF1-203ENST00000398137 SLURP1P55000 103 aa19.52■□□□□ 0.72
U2AF1-203ENST00000398137 RANGRFQ9HD47 186 aaPredicted RBP19.52■□□□□ 0.72
U2AF1-203ENST00000398137 C21orf62Q9NYP8 219 aa19.52■□□□□ 0.72
U2AF1-203ENST00000398137 RCL1Q9Y2P8 373 aaKnown RBP19.52■□□□□ 0.72
U2AF1-203ENST00000398137 PPP5D1E7EU14 171 aa19.51■□□□□ 0.71
U2AF1-203ENST00000398137 H3BP45 60 aa19.51■□□□□ 0.71
U2AF1-203ENST00000398137 OR8U8P0C7N1 319 aa19.51■□□□□ 0.71
U2AF1-203ENST00000398137 GPR183P32249 361 aa19.51■□□□□ 0.71
U2AF1-203ENST00000398137 OR4C12Q96R67 309 aa19.51■□□□□ 0.71
U2AF1-203ENST00000398137 PAIP2BQ9ULR5 123 aaKnown RBP19.51■□□□□ 0.71
U2AF1-203ENST00000398137 LSM5Q9Y4Y9 91 aaKnown RBP19.51■□□□□ 0.71
U2AF1-203ENST00000398137 C15orf62A8K5M9 175 aa19.5■□□□□ 0.71
U2AF1-203ENST00000398137 BMPR1BO00238 502 aa19.5■□□□□ 0.71
U2AF1-203ENST00000398137 OPRK1P41145 380 aa19.5■□□□□ 0.71
U2AF1-203ENST00000398137 S100A10P60903 97 aa19.5■□□□□ 0.71
U2AF1-203ENST00000398137 FAM209BQ5JX69 171 aa19.5■□□□□ 0.71
U2AF1-203ENST00000398137 NOXA1Q86UR1 476 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms