RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 AKR1C4P17516 323 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 ETV6P41212 452 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
UPK3A-202ENST00000396082 MFAP4P55083 255 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 ELLP55199 621 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-202ENST00000396082 SPANXN2Q5MJ10 180 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 BTNL8Q6UX41 500 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 SELENOHQ8IZQ5 122 aaKnown RBP13.22□□□□□ -0.29
UPK3A-202ENST00000396082 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 TMEM190Q8WZ59 177 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 WWC2-AS2Q96NR7 200 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
UPK3A-202ENST00000396082 ZNF436Q9C0F3 470 aaPredicted RBP13.22□□□□□ -0.29
UPK3A-202ENST00000396082 I3L2K1 104 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 NDUFA4O00483 81 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
UPK3A-202ENST00000396082 KLF9Q13886 244 aaPredicted RBP13.21□□□□□ -0.29
UPK3A-202ENST00000396082 ZNF79Q15937 498 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 WDR89Q96FK6 387 aaPredicted RBP13.21□□□□□ -0.29
UPK3A-202ENST00000396082 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 ZMAT4Q9H898 229 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.21□□□□□ -0.29
UPK3A-202ENST00000396082 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
UPK3A-202ENST00000396082 MLXQ9UH92 298 aa13.21□□□□□ -0.29
UPK3A-202ENST00000396082 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 A8MZ25 164 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
UPK3A-202ENST00000396082 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 ANXA3P12429 323 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
UPK3A-202ENST00000396082 RBPMS2Q6ZRY4 209 aaKnown RBP13.2□□□□□ -0.3
UPK3A-202ENST00000396082 CCDC190Q86UF4 302 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 TMEM61Q8N0U2 210 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 TMEM230Q96A57 120 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 TXN2Q99757 166 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 DAZ1Q9NQZ3 744 aaKnown RBP13.2□□□□□ -0.3
UPK3A-202ENST00000396082 C19orf73Q9NVV2 129 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 CACNG5Q9UF02 275 aa13.2□□□□□ -0.3
UPK3A-202ENST00000396082 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 CORTO00230 105 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 GNG7O60262 68 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 SCAF4O95104 1147 aaKnown RBP13.19□□□□□ -0.3
UPK3A-202ENST00000396082 ADMP35318 185 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 INPP1P49441 399 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 SPCS3P61009 180 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 Q6ZRM9 215 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 TMED4Q7Z7H5 227 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 GPR146Q96CH1 333 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 PRR13Q9NZ81 148 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
UPK3A-202ENST00000396082 YIF1AO95070 293 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 CTSGP08311 255 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 CD7P09564 240 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 C8orf88P0DMB2 117 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 TMEM187Q14656 261 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 OR52B4Q8NGK2 314 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 IL22RA2Q969J5 263 aa13.18□□□□□ -0.3
UPK3A-202ENST00000396082 CEBPZOSA8MTT3 80 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
UPK3A-202ENST00000396082 NXPH3O95157 252 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 SULT1A3P0DMM9 295 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 SULT1A4P0DMN0 295 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
UPK3A-202ENST00000396082 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
UPK3A-202ENST00000396082 OPRK1P41145 380 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 NPBWR1P48145 328 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 SRPXP78539 464 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 ANKRD55Q3KP44 614 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 TRIQKQ629K1 86 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 OR52E5Q8NH55 327 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
UPK3A-202ENST00000396082 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
UPK3A-202ENST00000396082 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
UPK3A-202ENST00000396082 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
UPK3A-202ENST00000396082 LGI3Q8N145 548 aa13.16□□□□□ -0.3
UPK3A-202ENST00000396082 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
UPK3A-202ENST00000396082 CACFD1Q9UGQ2 172 aa13.16□□□□□ -0.3
UPK3A-202ENST00000396082 COL7A1Q02388 2944 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 A0A0B4J2A0 478 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 C15orf62A8K5M9 175 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 K7EMT4 169 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 VAMP1P23763 118 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 HTR2BP41595 481 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 SUPT4H1P63272 117 aaKnown RBP13.15□□□□□ -0.3
UPK3A-202ENST00000396082 AARDQ4LEZ3 155 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 DEFB125Q8N687 156 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
UPK3A-202ENST00000396082 WFDC10AQ9H1F0 79 aa13.15□□□□□ -0.3
UPK3A-202ENST00000396082 SRD5A3Q9H8P0 318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms