RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 C17orf58Q2M2W7 97 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 TMEM155Q4W5P6 130 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF833PQ6ZTB9 187 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 BAGE3Q86Y29 109 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 BAGE2Q86Y30 109 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 MUC15Q8N387 334 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 OR10G8Q8NGN5 311 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 RND1Q92730 232 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 GAFA1Q96PS6 74 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 MRPL18Q9H0U6 180 aaKnown RBP4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF586Q9NXT0 402 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 RNF7Q9UBF6 113 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SVILO95425 2214 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 IGKV1D-13A0A0B4J2D9 117 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 C17orf98A8MV24 154 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SYNGR2O43760 224 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 CLDN14O95500 239 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 IGHV3-9P01782 118 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SCTP09683 121 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 NBEAP1P0C6P0 100 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 IGKV1-13P0DP09 117 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 PRDX2P32119 198 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 BRWD1-AS2P59051 145 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 GNB1P62873 340 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 Q6ZRM9 215 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 STPG3Q8N7X2 389 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 SIGLECL1Q8N7X8 197 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 RNF5Q99942 180 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 ZNF257Q9Y2Q1 563 aa4.39□□□□□ -1.71
VPS41-203ENST00000395969 TBL2Q9Y4P3 447 aaKnown RBP4.39□□□□□ -1.71
VPS41-203ENST00000395969 BSNQ9UPA5 3926 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 TRBV9A0A0B4J1U6 114 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 KBTBD11-OT1A0A1B0GTJ5 212 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 A0A1W2PRX2 142 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 C12orf77C9JDV5 145 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 C11orf94C9JXX5 98 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 PAGE4O60829 102 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 IGKV1-39P01597 117 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 IGKV1D-39P04432 117 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 CBLN1P23435 193 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 APOBEC3AP31941 199 aaPredicted RBP4.38□□□□□ -1.71
VPS41-203ENST00000395969 ALKBH6Q3KRA9 238 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 OR10J3Q5JRS4 329 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 AMMECR1LQ6DCA0 310 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 LCN12Q6JVE5 192 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 WFDC3Q8IUB2 231 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 BATF2Q8N1L9 274 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 GALMQ96C23 342 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 C5orf30Q96GV9 206 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 GTSF1LQ9H1H1 148 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 SLC25A22Q9H936 323 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 CLN8Q9UBY8 286 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 ZNF292O60281 2723 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 OR7C1O76099 320 aaPredicted RBP4.38□□□□□ -1.71
VPS41-203ENST00000395969 TCTAP57738 103 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 KIAA1644Q3SXP7 199 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 TMEM14EPQ6UXP3 125 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 SLC25A48Q6ZT89 311 aaKnown RBP4.38□□□□□ -1.71
VPS41-203ENST00000395969 NIT1Q86X76 327 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 KCNS1Q96KK3 526 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 CDIP1Q9H305 208 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 KCNIP2Q9NS61 270 aa4.38□□□□□ -1.71
VPS41-203ENST00000395969 TRBV20OR9-2A0A075B6H5 130 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 A0A1W2PS18 150 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 OR2T8A6NH00 312 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 DEFB108AA8MXU0 73 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 PRSS46E5RG02 174 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 TIMM8AO60220 97 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 C3orf79P0CE67 100 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 DEFA4P12838 97 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 CCL2P13500 99 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ZNF83P51522 516 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 TIRAPP58753 221 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ADORA2A-AS1P86434 159 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ZNF672Q499Z4 452 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 GFRALQ6UXV0 394 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 TCF24Q7RTU0 167 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 OR10G9Q8NGN4 311 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 OR10G7Q8NGN6 311 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 OR1N2Q8NGR9 330 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 IFI27L2Q9H2X8 130 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 GNB4Q9HAV0 340 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 CCL28Q9NRJ3 127 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 IL36BQ9NZH7 164 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ARL2-SNX15V9GYD0 113 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 CUL9Q8IWT3 2517 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 UBE2L5PA0A1B0GUS4 154 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 H0Y8G0 127 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms