RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 RPL29P47914 159 aaKnown RBP8.8□□□□□ -1
CASP3-202ENST00000393585 AKR1D1P51857 326 aa8.8□□□□□ -1
CASP3-202ENST00000393585 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
CASP3-202ENST00000393585 PRR20EP86478 221 aa8.8□□□□□ -1
CASP3-202ENST00000393585 PRR20CP86479 221 aa8.8□□□□□ -1
CASP3-202ENST00000393585 PRR20DP86480 221 aa8.8□□□□□ -1
CASP3-202ENST00000393585 PRR20BP86481 221 aa8.8□□□□□ -1
CASP3-202ENST00000393585 PRR20AP86496 221 aa8.8□□□□□ -1
CASP3-202ENST00000393585 ZNF674Q2M3X9 581 aa8.8□□□□□ -1
CASP3-202ENST00000393585 SLC16A13Q7RTY0 426 aa8.8□□□□□ -1
CASP3-202ENST00000393585 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
CASP3-202ENST00000393585 PPP1R27Q86WC6 154 aa8.8□□□□□ -1
CASP3-202ENST00000393585 MMD2Q8IY49 270 aa8.8□□□□□ -1
CASP3-202ENST00000393585 MANBALQ9NQG1 85 aa8.8□□□□□ -1
CASP3-202ENST00000393585 DPM3Q9P2X0 92 aa8.8□□□□□ -1
CASP3-202ENST00000393585 ABCA1O95477 2261 aa8.8□□□□□ -1
CASP3-202ENST00000393585 SPG11Q96JI7 2443 aa8.8□□□□□ -1
CASP3-202ENST00000393585 FNDC10F2Z333 226 aa8.8□□□□□ -1
CASP3-202ENST00000393585 FCN1O00602 326 aa8.8□□□□□ -1
CASP3-202ENST00000393585 SOX15O60248 233 aa8.8□□□□□ -1
CASP3-202ENST00000393585 LINC00869P0C866 280 aa8.8□□□□□ -1
CASP3-202ENST00000393585 AREGP15514 252 aa8.8□□□□□ -1
CASP3-202ENST00000393585 RPL35P42766 123 aaKnown RBP8.8□□□□□ -1
CASP3-202ENST00000393585 KIAA0141Q14154 515 aaPredicted RBP8.8□□□□□ -1
CASP3-202ENST00000393585 SPNS3Q6ZMD2 512 aa8.8□□□□□ -1
CASP3-202ENST00000393585 RPUSD4Q96CM3 377 aaKnown RBP8.8□□□□□ -1
CASP3-202ENST00000393585 KCNIP2Q9NS61 270 aa8.8□□□□□ -1
CASP3-202ENST00000393585 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
CASP3-202ENST00000393585 IGLC7A0M8Q6 106 aa8.79□□□□□ -1
CASP3-202ENST00000393585 VENTXO95231 258 aa8.79□□□□□ -1
CASP3-202ENST00000393585 STAG3L2P0CL84 134 aa8.79□□□□□ -1
CASP3-202ENST00000393585 STAG3L3P0CL85 134 aa8.79□□□□□ -1
CASP3-202ENST00000393585 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
CASP3-202ENST00000393585 FBLN7Q53RD9 439 aa8.79□□□□□ -1
CASP3-202ENST00000393585 FAM24BQ8N5W8 94 aa8.79□□□□□ -1
CASP3-202ENST00000393585 MRPL36Q9P0J6 103 aaKnown RBP8.79□□□□□ -1
CASP3-202ENST00000393585 ODF3BA8MYP8 253 aa8.79□□□□□ -1
CASP3-202ENST00000393585 CRYBA1P05813 215 aa8.79□□□□□ -1
CASP3-202ENST00000393585 ATP5G3P48201 142 aa8.79□□□□□ -1
CASP3-202ENST00000393585 LGALS4P56470 323 aa8.79□□□□□ -1
CASP3-202ENST00000393585 PLGLAQ15195 96 aa8.79□□□□□ -1
CASP3-202ENST00000393585 MMDQ15546 238 aa8.79□□□□□ -1
CASP3-202ENST00000393585 SSX2Q16385 188 aa8.79□□□□□ -1
CASP3-202ENST00000393585 FAM78BQ5VT40 261 aa8.79□□□□□ -1
CASP3-202ENST00000393585 LINC00518Q8N0U6 118 aa8.79□□□□□ -1
CASP3-202ENST00000393585 HIST1H2BAQ96A08 127 aa8.79□□□□□ -1
CASP3-202ENST00000393585 SLC35E1Q96K37 410 aa8.79□□□□□ -1
CASP3-202ENST00000393585 MAP1AP78559 2803 aaPredicted RBP8.78□□□□□ -1
CASP3-202ENST00000393585 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
CASP3-202ENST00000393585 C11orf94C9JXX5 98 aa8.78□□□□□ -1
CASP3-202ENST00000393585 FOXH1O75593 365 aa8.78□□□□□ -1
CASP3-202ENST00000393585 COMPP49747 757 aaPredicted RBP8.78□□□□□ -1
CASP3-202ENST00000393585 CST9LP1Q5W188 147 aa8.78□□□□□ -1
CASP3-202ENST00000393585 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
CASP3-202ENST00000393585 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
CASP3-202ENST00000393585 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
CASP3-202ENST00000393585 C15orf54Q8N8G6 183 aa8.78□□□□□ -1
CASP3-202ENST00000393585 NPIPB3Q92617 1050 aa8.78□□□□□ -1
CASP3-202ENST00000393585 BBC3Q96PG8 261 aaPredicted RBP8.78□□□□□ -1
CASP3-202ENST00000393585 SMIM7Q9BQ49 75 aa8.78□□□□□ -1
CASP3-202ENST00000393585 CSMD2Q7Z408 3487 aa8.78□□□□□ -1
CASP3-202ENST00000393585 ZNF462Q96JM2 2506 aa8.78□□□□□ -1
CASP3-202ENST00000393585 IGHV3-21A0A0B4J1V1 117 aa8.78□□□□□ -1
CASP3-202ENST00000393585 OVOL3O00110 214 aa8.78□□□□□ -1
CASP3-202ENST00000393585 IGHV4-39P01824 125 aa8.78□□□□□ -1
CASP3-202ENST00000393585 SUB1P53999 127 aaKnown RBP eCLIP8.78□□□□□ -11e-6■■■■■ 30.7
CASP3-202ENST00000393585 MFAP2P55001 183 aa8.78□□□□□ -1
CASP3-202ENST00000393585 RHOBP62745 196 aa8.78□□□□□ -1
CASP3-202ENST00000393585 OR51G1Q8NGK1 321 aa8.78□□□□□ -1
CASP3-202ENST00000393585 CACNG8Q8WXS5 425 aa8.78□□□□□ -1
CASP3-202ENST00000393585 CFHR4Q92496 578 aa8.78□□□□□ -1
CASP3-202ENST00000393585 PARLQ9H300 379 aa8.78□□□□□ -1
CASP3-202ENST00000393585 OR2C1O95371 312 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 CXorf1O96002 111 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
CASP3-202ENST00000393585 GPX4P36969 197 aaPredicted RBP8.77□□□□□ -1.01
CASP3-202ENST00000393585 CEACAM3P40198 252 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 HES1Q14469 280 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1.01
CASP3-202ENST00000393585 MISP3Q96FF7 219 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 LPAR2Q9HBW0 351 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 SDF2L1Q9HCN8 221 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 MLXQ9UH92 298 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 TEX22C9J3V5 150 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 TMEM250H0YL14 139 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 NPPCP23582 126 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 LMO4P61968 165 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 PAX2Q02962 417 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 ZNF343Q6P1L6 599 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 ZFP82Q8N141 532 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 SRSF12Q8WXF0 261 aaKnown RBP8.77□□□□□ -1.01
CASP3-202ENST00000393585 TUBA4BQ9H853 241 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 URGCP-MRPS24S4R325 110 aa8.77□□□□□ -1.01
CASP3-202ENST00000393585 CELSR2Q9HCU4 2923 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 RND2P52198 227 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 ZNF90Q03938 601 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 SIRPDQ9H106 197 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 EPG5Q9HCE0 2579 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 GCHFRP30047 84 aa8.76□□□□□ -1.01
CASP3-202ENST00000393585 ADIRFQ15847 76 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms