RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 C6orf62Q9GZU0 229 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TUBA4BQ9H853 241 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 XAGE1AQ9HD64 81 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 SLC39A9Q9NUM3 307 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TXNL4BQ9NX01 149 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 GSKIPQ9P0R6 139 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CKLFQ9UBR5 152 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 OR52A1Q9UKL2 312 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 TRAPPC2LQ9UL33 140 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ERGIC3Q9Y282 383 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ASB4Q9Y574 426 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 HSPE1-MOB4S4R3N1 261 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DICER1Q9UPY3 1922 aaKnown RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 PLXND1Q9Y4D7 1925 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 ARHGEF10O15013 1369 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 CACNA1SQ13698 1873 aa0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 COL27A1Q8IZC6 1860 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 COL2A1P02458 1487 aaPredicted RBP0.67□□□□□ -2.3
TRAJ3-201ENST00000390534 DOCK4Q8N1I0 1966 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CEP170Q5SW79 1584 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 KIF13BQ9NQT8 1826 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SDK2Q58EX2 2172 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 NUP160Q12769 1436 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SETD5Q9C0A6 1442 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 YTHDC2Q9H6S0 1430 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 COL18A1P39060 1754 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 IGKV2-28A0A075B6P5 120 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A087WX48 190 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A087X0T9 212 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A0D9SEW6 157 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A0J9YW62 118 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 IRGMA1A4Y4 181 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 C11orf86A6NJI1 115 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 H3BPC8 53 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 H7BYZ3 331 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 UBFD1O14562 309 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 DEGS1O15121 323 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SLC22A1O15245 554 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CYB5BO43169 146 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 GNRH2O43555 120 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CPSF4O95639 269 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CDS2O95674 445 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 NPYP01303 97 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 IGKV2D-28P01615 120 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 IGHV3-7P01780 117 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 C1QAP02745 245 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 PPBPP02775 128 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 IGKV1-16P04430 117 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF728P0DKX0 622 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 BCL2P10415 239 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 HRES1P13985 223 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF14P17017 642 aaPredicted RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 RPS3P23396 243 aaKnown RBP eCLIP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 COL8A2P25067 703 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 S100A4P26447 101 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 S100A11P31949 105 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SRP14P37108 136 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 AKR1C3P42330 323 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 EIF2B2P49770 351 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 LINC00315P59091 139 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CKS1BP61024 79 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 AP1S1P61966 158 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H4AP62805 103 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 EIF5AP63241 154 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SUPT4H1P63272 117 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 BIKQ13323 160 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 MSMO1Q15800 293 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 RTL8BQ17RB0 113 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CCDC153Q494R4 210 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CCDC58Q4VC31 144 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 LINC01554Q52M75 96 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SPANXN3Q5MJ09 141 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 FKBP1CQ5VVH2 108 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 LYZL1Q6UWQ5 148 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 HRCT1Q6UXD1 115 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 TOMM20LQ6UXN7 152 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 SH2D6Q7Z4S9 175 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 KTN1-AS1Q86SY8 53 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 TRAPPC6BQ86SZ2 158 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 ANGPTL5Q86XS5 388 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF561Q8N587 486 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 RPP25LQ8N5L8 163 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 TERB2Q8NHR7 220 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 ADAT3Q96EY9 351 aaPredicted RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 CAPZA3Q96KX2 299 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 HSPB9Q9BQS6 159 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 MIEN1Q9BRT3 115 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 GINS4Q9BRT9 223 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 RTL8AQ9BWD3 113 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 OR2J1Q9GZK6 312 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 AICDAQ9GZX7 198 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 DUSP21Q9H596 190 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 TMEM138Q9NPI0 162 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 OTORQ9NRC9 128 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 OSTCQ9NRP0 149 aa0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 MRPL16Q9NX20 251 aaKnown RBP0.66□□□□□ -2.3
TRAJ3-201ENST00000390534 NAT8BQ9UHF3 227 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms