RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
TMEM88B-201ENST00000378821 ZNF785A8K8V0 405 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 NDUFB6O95139 128 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 IFNA17P01571 189 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 HLA-AP01891 365 aaKnown RBP14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 ANXA3P12429 323 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 DEFB114Q30KQ6 69 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 AARDQ4LEZ3 155 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 GTSCR1Q86UQ5 136 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 CENPSQ8N2Z9 138 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 ZNF114Q8NC26 417 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 OR1P1Q8NH06 330 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 C7orf50Q9BRJ6 194 aaKnown RBP14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 PDCD10Q9BUL8 212 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
TMEM88B-201ENST00000378821 TRBV7-1A0A0A6YYK4 115 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 IGHV3-21A0A0B4J1V1 117 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 A0A0B4J2A0 478 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 C2orf70A6NJV1 201 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 PLA2G10O15496 165 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 VAMP1P23763 118 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 ARL3P36405 182 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 SRPXP78539 464 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 PPP1R1AQ13522 171 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 HAGHQ16775 308 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 CD300EQ496F6 205 aaPredicted RBP14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 NMSQ5H8A3 153 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 LYZL2Q7Z4W2 148 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 LGI3Q8N145 548 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 VN1R17PQ8TDU5 208 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 BATF3Q9NR55 127 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 TECRQ9NZ01 308 aaKnown RBP14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 SHPKQ9UHJ6 478 aa14.27□□□□□ -0.13
TMEM88B-201ENST00000378821 CENPXA8MT69 81 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 K7EIM0 57 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 OR2C1O95371 312 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 FOLR2P14207 255 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 GPR183P32249 361 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 HOXA1P49639 335 aaPredicted RBP14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 ANKRD55Q3KP44 614 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 OR1L6Q8NGR2 347 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 CCDC32Q9BV29 185 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 FLVCR2Q9UPI3 526 aa14.26□□□□□ -0.13
TMEM88B-201ENST00000378821 A8MWP6 167 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 SFT2D2O95562 160 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 CLEC3BP05452 202 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 SPCS3P61009 180 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 SCARB1Q8WTV0 552 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 S100ZQ8WXG8 99 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 MISP3Q96FF7 219 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 SPATA25Q9BR10 227 aa14.25□□□□□ -0.13
TMEM88B-201ENST00000378821 LYRM1O43325 122 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 NXPH3O95157 252 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 SULT1A3P0DMM9 295 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 SULT1A4P0DMN0 295 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 LYL1P12980 280 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 CBLN1P23435 193 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 UBE2MP61081 183 aaKnown RBP14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 OR52E5Q8NH55 327 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 ENY2Q9NPA8 101 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
TMEM88B-201ENST00000378821 F8W735 103 aaPredicted RBP14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 I3L2K1 104 aa14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 RNASE2P10153 161 aaKnown RBP14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 EDN2P20800 178 aa14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 LRTM2Q8N967 370 aa14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 NEURL2Q9BR09 285 aa14.23□□□□□ -0.13
TMEM88B-201ENST00000378821 DUXBA0A1W2PPF3 345 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 TMEM213A2RRL7 107 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 OR2T8A6NH00 312 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 TGOLN2O43493 480 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 SNCAP37840 140 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 CD81P60033 236 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 SMCO1Q147U7 214 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 FAM106AQ4KMX7 169 aa14.22□□□□□ -0.13
TMEM88B-201ENST00000378821 C9orf170A2RU37 121 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 MT-CO2P00403 227 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 CD7P09564 240 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 C8orf88P0DMB2 117 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 ANXA7P20073 488 aaKnown RBP14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 BSXQ3C1V8 233 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 PVRIGQ6DKI7 326 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 PLET1Q6UQ28 207 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 UBAC2Q8NBM4 344 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 DYNLRB2Q8TF09 96 aa14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 PINX1Q96BK5 328 aaKnown RBP14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 WDR12Q9GZL7 423 aaKnown RBP14.21□□□□□ -0.13
TMEM88B-201ENST00000378821 CSMD3Q7Z407 3707 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 PIGBOS1A0A0B4J2F0 54 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 IGHV3-35A0A0C4DH35 117 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 CEBPZOSA8MTT3 80 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 IGHV3-48P01763 117 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 OR4E1P0C645 316 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 DHRS2Q13268 280 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 ZNF846Q147U1 533 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms