RNA–Protein interactions for RNA: ENST00000373220.7

CLSPN-203, Transcript of claspin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSPN, Length 3,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-203ENST00000373220 C16orf82Q7Z2V1 217 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 C9orf106Q8NAJ2 232 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 SNRNP40Q96DI7 357 aaKnown RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 SIRT7Q9NRC8 400 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 FUT9Q9Y231 359 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 CHD3Q12873 2000 aaKnown RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 PRUNE2Q8WUY3 3088 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 F8P00451 2351 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 TRAV1-1A0A0B4J248 108 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 NAPSAO96009 420 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 HPRT1P00492 218 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 OR10J4P0C629 311 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 PGA5P0DJD9 388 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 SRSF6Q13247 344 aaKnown RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 PSG5Q15238 335 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 RPL39P5Q59GN2 51 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 Q71RC1 249 aaPredicted RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 WDR61Q9GZS3 305 aaKnown RBP4.12□□□□□ -1.75
CLSPN-203ENST00000373220 C7orf69Q9H7B7 122 aa4.12□□□□□ -1.75
CLSPN-203ENST00000373220 ZGRF1Q86YA3 2104 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 A0A1W2PRD5 423 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 A0A1W2PRF3 423 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 A0A1W2PRM7 423 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 RAMP3O60896 148 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 CYB5R3P00387 301 aaPredicted RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 COX7A1P24310 79 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 TCL1AP56279 114 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 RPL31P62899 125 aaKnown RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF324BQ6AW86 544 aaPredicted RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ACP7Q6ZNF0 438 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 S100A7AQ86SG5 101 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 LRRC75A-AS1Q8N1F1 130 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 CMTM2Q8TAZ6 248 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 NPFFR1Q9GZQ6 430 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 MANBALQ9NQG1 85 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF355PQ9NSJ1 428 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF835Q9Y2P0 537 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 PIEZO2Q9H5I5 2752 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 CFAP54Q96N23 3096 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 RAB29O14966 203 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 THBS3P49746 956 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 LINC00205P59089 165 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 FAM27E3Q08E93 113 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 FOXF2Q12947 444 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 HERPUD1Q15011 391 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 NMSQ5H8A3 153 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 SLC35E4Q6ICL7 350 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 DPPA3Q6W0C5 159 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 MMD2Q8IY49 270 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF383Q8NA42 475 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 OR5B3Q8NH48 314 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 QTRT1Q9BXR0 403 aaKnown RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 VSIRQ9H7M9 311 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 HES4Q9HCC6 221 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 CALYQ9NYX4 217 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 PXMP4Q9Y6I8 212 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 IGHV3-21A0A0B4J1V1 117 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 A0A0G2JRQ6 117 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF503-AS2A6NEH8 195 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 IGHV3-48P01763 117 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ORM2P19652 201 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 SPCS3P61009 180 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 TFF3Q07654 80 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 RNF151Q2KHN1 245 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF506Q5JVG8 444 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF525Q8N782 197 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 PACRGQ96M98 296 aaPredicted RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 FGF23Q9GZV9 251 aaPredicted RBP4.11□□□□□ -1.75
CLSPN-203ENST00000373220 WDR83OSQ9Y284 106 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 RNF115Q9Y4L5 304 aa4.11□□□□□ -1.75
CLSPN-203ENST00000373220 POLQO75417 2590 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.1□□□□□ -1.758e-11■■■■□ 22.1
CLSPN-203ENST00000373220 IGKV1-6A0A0C4DH72 117 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 FCN1O00602 326 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 CT45A6P0DMU7 189 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 CT45A5P0DMU8 189 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 CT45A7P0DMV0 189 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 KIR2DS2P43631 304 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 IER3P46695 156 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 GNG4P50150 75 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 LRRC75BQ2VPJ9 315 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 VMA21Q3ZAQ7 101 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 CT45A1Q5HYN5 189 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 Q6ZRM9 215 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 CT45A3Q8NHU0 189 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 SGMS2Q8NHU3 365 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 ADTRPQ96IZ2 230 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 SPATA25Q9BR10 227 aa4.1□□□□□ -1.75
CLSPN-203ENST00000373220 NPVFQ9HCQ7 196 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms