RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 EPOPA6NHQ4 379 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 IGLC1P0CG04 106 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 MRPL49Q13405 166 aaKnown RBP6.29□□□□□ -1.4
BRCA1-201ENST00000352993 RPL39P5Q59GN2 51 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 GUSBP11Q6P575 273 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 PGLYRP4Q96LB8 373 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 COMMD5Q9GZQ3 224 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 OCIAD1Q9NX40 245 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 AMMECR1Q9Y4X0 333 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF318Q5VUA4 2279 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 TRAV5A0A0B4J249 113 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 A0A1W2PRE2 83 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 SMPD2O60906 423 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 DKK1O94907 266 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 HLA-DRB1P01911 266 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 MYOD1P15172 320 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 CCL7P80098 99 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 LYSMD4Q5XG99 296 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 C5orf17Q8NAS9 161 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM116Q8NCL8 245 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 MUC3AQ02505 3323 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 PI4KAP42356 2102 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 PRSS47A8MTI9 375 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 PLGLB1Q02325 96 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 ALKBH6Q3KRA9 238 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM97Q5BJF2 176 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 BHLHA15Q7RTS1 189 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-201ENST00000352993 OR13A1Q8NGR1 328 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 SLC25A40Q8TBP6 338 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 ICE1Q9Y2F5 2266 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 PRR33A8MZF0 331 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 B3GALT5-AS1P59052 145 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 CT55Q8WUE5 264 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 DAZAP1Q96EP5 407 aaKnown RBP6.28□□□□□ -1.4
BRCA1-201ENST00000352993 GRAMD2BQ96HH9 432 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 IGHV1-45A0A0A0MS14 117 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 A6NDN8 102 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 PLAUP00749 431 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 WDR86Q86TI4 376 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 OR2K2Q8NGT1 345 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 BLNKQ8WV28 456 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 LEAP2Q969E1 77 aa6.28□□□□□ -1.4
BRCA1-201ENST00000352993 DYSFO75923 2080 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 NBEAP1P0C6P0 100 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 PYYP10082 97 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 DUTP33316 252 aaKnown RBP6.27□□□□□ -1.41
BRCA1-201ENST00000352993 VDAC2P45880 294 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-201ENST00000352993 GNG5P63218 68 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 NHLH1Q02575 133 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 C3AR1Q16581 482 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 MLANAQ16655 118 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 TM4SF20Q53R12 229 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 FAM214BQ7L5A3 538 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 TRIOO75962 3097 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 OR5AL1P0C617 328 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 C8orf88P0DMB2 117 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 HBBP68871 147 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 OR8A1Q8NGG7 326 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 ABI3Q9P2A4 366 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 IGHV5-10-1A0A0J9YXX1 117 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 IGHV3-48P01763 117 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 LIPFP07098 398 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 RTL8BQ17RB0 113 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 MDP1Q86V88 176 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 OR9G1Q8NH87 305 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 TPPP3Q9BW30 176 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 SCRT2Q9NQ03 307 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 SLC25A10Q9UBX3 287 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-201ENST00000352993 METRNQ9UJH8 293 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 LSM4Q9Y4Z0 139 aaKnown RBP6.27□□□□□ -1.41
BRCA1-201ENST00000352993 SPCS1Q9Y6A9 102 aa6.27□□□□□ -1.41
BRCA1-201ENST00000352993 PRR14LQ5THK1 2151 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 A0A0G2JLM5 398 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 G3V4G9 280 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 SLC25A5P05141 298 aaKnown RBP6.26□□□□□ -1.41
BRCA1-201ENST00000352993 COX6A1P12074 109 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 SLC35E4Q6ICL7 350 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 VWA1Q6PCB0 445 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 TNFRSF14Q92956 283 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 PERPQ96FX8 193 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 FZR1Q9UM11 496 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 ABCA1O95477 2261 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 TET2Q6N021 2002 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-201ENST00000352993 A0A1W2PQM1 296 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 COX7A2P2O60397 106 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 KLF5Q13887 457 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-201ENST00000352993 ZNF146Q15072 292 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 TBC1D28Q2M2D7 210 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 LHFPL4Q7Z7J7 247 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 WDR31Q8NA23 367 aa6.26□□□□□ -1.41
BRCA1-201ENST00000352993 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms