RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IGHV2-26A0A0B4J1V2 119 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 CTXND1A0A1B0GTU2 59 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 LOC102723971A0A1B0GUV8 181 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 SRRM4A7MD48 611 aaKnown RBP6.57□□□□□ -1.36
CD44-205ENST00000352818 SEC14L6B5MCN3 397 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 CLDN34H7C241 214 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 IGKV1-16P04430 117 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 NPY1RP25929 384 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 PAX6P26367 422 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 CD1BP29016 333 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 NPBWR1P48145 328 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 PPT1P50897 306 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 PRRX1P54821 245 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 ERVFRD-1P60508 538 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 LMO4P61968 165 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 CCL20P78556 96 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 ZNF726P1Q15940 193 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 HLA-DRB5Q30154 266 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 C2orf83Q53S99 150 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 SPINK9Q5DT21 86 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 WDR25Q64LD2 544 aaPredicted RBP6.57□□□□□ -1.36
CD44-205ENST00000352818 ACSM6Q6P461 480 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 TGIF2LXQ8IUE1 241 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 Q8N7P7 452 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 SLC24A4Q8NFF2 622 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 TMEM167AQ8TBQ9 72 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 SFT2D1Q8WV19 159 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 TMEM170AQ8WVE7 144 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 LHX4Q969G2 390 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 FLYWCH2Q96CP2 140 aaKnown RBP6.57□□□□□ -1.36
CD44-205ENST00000352818 HARBI1Q96MB7 349 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 P2RX4Q99571 388 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 CLEC7AQ9BXN2 247 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 PLEKHA3Q9HB20 300 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 WASHC3Q9Y3C0 194 aa6.57□□□□□ -1.36
CD44-205ENST00000352818 AMMECR1Q9Y4X0 333 aaPredicted RBP6.57□□□□□ -1.36
CD44-205ENST00000352818 TRAV20A0A0B4J274 112 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 PPIAL4CA0A0B4J2A2 164 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 A0A1W2PN81 502 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 hCG_1809904A0A1W2PP81 198 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 A0A1W2PPE2 198 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 A0A1W2PR64 198 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 A0A1W2PRV1 198 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 MAP1LC3B2A6NCE7 125 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 FAM74A7A6NL05 159 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 M0R1W7 72 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 RRHO14718 337 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 IFNA1P01562 189 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 IGLV2-23P01705 113 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 LIPFP07098 398 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 SRP19P09132 144 aaKnown RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 PPIAL4GP0DN37 164 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 BCL2P10415 239 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 CHRNA7P36544 502 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 OPRK1P41145 380 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 LGALS7P47929 136 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 RHEBQ15382 184 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 ACOT6Q3I5F7 207 aaPredicted RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 FAM74A3Q4VXF1 159 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 FFAR4Q5NUL3 377 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 SSX7Q7RTT5 188 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 OR1L8Q8NGR8 309 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 MAP1LC3BQ9GZQ8 125 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 VSIRQ9H7M9 311 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 PATZ1Q9HBE1 687 aaKnown RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 ZNRD1Q9P1U0 126 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 TMA7Q9Y2S6 64 aaKnown RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 SOX21Q9Y651 276 aaPredicted RBP6.56□□□□□ -1.36
CD44-205ENST00000352818 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
CD44-205ENST00000352818 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 PLXNB1O43157 2135 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 WNK2Q9Y3S1 2297 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 TEX50A0A1B0GTY4 177 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 K7EIL1 84 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 CA2P00918 260 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 ELLP55199 621 aaPredicted RBP6.55□□□□□ -1.36
CD44-205ENST00000352818 RPL8P62917 257 aaKnown RBP6.55□□□□□ -1.36
CD44-205ENST00000352818 OXLD1Q5BKU9 147 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 SOHLH1Q5JUK2 328 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 AVPI1Q5T686 147 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
CD44-205ENST00000352818 TEX45Q8NA69 505 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 NANPQ8TBE9 248 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 RNF5Q99942 180 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 RARRES2Q99969 163 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 GGTLC1Q9BX51 225 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 ACTR3CQ9C0K3 210 aaPredicted RBP6.55□□□□□ -1.36
CD44-205ENST00000352818 TUBA4BQ9H853 241 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 NPVFQ9HCQ7 196 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 NDUFA4L2Q9NRX3 87 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 SLC39A9Q9NUM3 307 aa6.55□□□□□ -1.36
CD44-205ENST00000352818 C22orf46C9J442 243 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 C3orf84H3BNL1 204 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms