RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CXorf1O96002 111 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 PRR20EP86478 221 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 PRR20CP86479 221 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 PRR20DP86480 221 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 PRR20BP86481 221 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 PRR20AP86496 221 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 LRRC10Q5BKY1 277 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 BEND2Q8NDZ0 799 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 VKORC1Q9BQB6 163 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 YTHDF2Q9Y5A9 579 aaKnown RBP16.31■□□□□ 0.2
SPG7-202ENST00000341316 TPRP12270 2363 aaKnown RBP16.31■□□□□ 0.2
SPG7-202ENST00000341316 LRBAP50851 2863 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 IGKV1OR2-108A0A075B7D4 117 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 VSTM5A8MXK1 200 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 LINC00869P0C866 280 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
SPG7-202ENST00000341316 DLX6P56179 175 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 RBPJQ06330 500 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 OSR1Q8TAX0 266 aaPredicted RBP16.31■□□□□ 0.2
SPG7-202ENST00000341316 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
SPG7-202ENST00000341316 ADMP35318 185 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 OCC1Q8TAD7 63 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 TXNDC17Q9BRA2 123 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 FKBP11Q9NYL4 201 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.3■□□□□ 0.2
SPG7-202ENST00000341316 SCGB1D1O95968 90 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 APOA2P02652 100 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 RNASE2P10153 161 aaKnown RBP16.3■□□□□ 0.2
SPG7-202ENST00000341316 TEX38Q6PEX7 206 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 OR10X1Q8NGY0 326 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 DCHS2Q6V1P9 2916 aa16.3■□□□□ 0.2
SPG7-202ENST00000341316 OR5B3Q8NH48 314 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 LINC01560Q8TB33 94 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 ST6GALNAC6Q969X2 333 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 NABP2Q9BQ15 211 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 EREGO14944 169 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 GCHFRP30047 84 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 RAB31Q13636 194 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 TMEM177Q53S58 311 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 C2orf83Q53S99 150 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 OR10G8Q8NGN5 311 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 SLC45A2Q9UMX9 530 aa16.29■□□□□ 0.2
SPG7-202ENST00000341316 ABCA4P78363 2273 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 IGHV1-69-2A0A0G2JMI3 117 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 FNDC10F2Z333 226 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 GATA2P23769 480 aaPredicted RBP16.28■□□□□ 0.2
SPG7-202ENST00000341316 GRNP28799 593 aaKnown RBP16.28■□□□□ 0.2
SPG7-202ENST00000341316 RHOBP62745 196 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 C11orf42Q8N5U0 333 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 ZNF596Q8TC21 504 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 FLYWCH2Q96CP2 140 aaKnown RBP16.28■□□□□ 0.2
SPG7-202ENST00000341316 NDUFA4L2Q9NRX3 87 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 KAAG1Q9UBP8 84 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 GRIFINA4D1Z8 144 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 LYNX1G3V0Z9 82 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 LYNX1P0DP58 116 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 APOBEC3AP31941 199 aaPredicted RBP16.28■□□□□ 0.2
SPG7-202ENST00000341316 DLX1P56177 255 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 RAB4BP61018 213 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 TMEM155Q4W5P6 130 aa16.28■□□□□ 0.2
SPG7-202ENST00000341316 ACTL6BO94805 426 aa16.27■□□□□ 0.2
SPG7-202ENST00000341316 YPEL3P61236 119 aaPredicted RBP16.27■□□□□ 0.2
SPG7-202ENST00000341316 MIR17HGQ75NE6 70 aa16.27■□□□□ 0.2
SPG7-202ENST00000341316 TGIF2LXQ8IUE1 241 aa16.27■□□□□ 0.2
SPG7-202ENST00000341316 LINC00311Q8N616 119 aa16.27■□□□□ 0.2
SPG7-202ENST00000341316 OR4P4Q8NGL7 312 aa16.27■□□□□ 0.2
SPG7-202ENST00000341316 POLR3KQ9Y2Y1 108 aaPredicted RBP16.27■□□□□ 0.2
SPG7-202ENST00000341316 CGB1A6NKQ9 187 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 K7EN84 100 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 RPL8P62917 257 aaKnown RBP16.26■□□□□ 0.19
SPG7-202ENST00000341316 HLA-DRB5Q30154 266 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 C10orf55Q5SWW7 151 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 OR1L8Q8NGR8 309 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 RITA1Q96K30 269 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 MS4A10Q96PG2 267 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 TACC2O95359 2948 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 CD3EP07766 207 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 ZNF90Q03938 601 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 OR9G1Q8NH87 305 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 TMEM186Q96B77 213 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 COMMD5Q9GZQ3 224 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 NAGKQ9UJ70 344 aa16.26■□□□□ 0.19
SPG7-202ENST00000341316 FAM90A27PA6NNH2 459 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 SLC17A3O00476 420 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 SIAH2O43255 324 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 IGLV2-23P01705 113 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 IGHV1-8P0DP01 117 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 CBLN1P23435 193 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 PRB3Q04118 309 aaPredicted RBP16.25■□□□□ 0.19
SPG7-202ENST00000341316 C8orf31Q8N9H6 132 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 OR4C13Q8NGP0 309 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 CHODLQ9H9P2 273 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 OR10J1P30954 320 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 CMTM2Q8TAZ6 248 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 MSRB2Q9Y3D2 182 aa16.25■□□□□ 0.19
SPG7-202ENST00000341316 ANKHD1Q8IWZ3 2542 aaKnown RBP16.24■□□□□ 0.19
SPG7-202ENST00000341316 B9A039 149 aa16.24■□□□□ 0.19
SPG7-202ENST00000341316 PDPNQ86YL7 162 aa16.24■□□□□ 0.19
SPG7-202ENST00000341316 TMEM167AQ8TBQ9 72 aa16.24■□□□□ 0.19
SPG7-202ENST00000341316 TPSG1Q9NRR2 321 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms