RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
BRCC3-202ENST00000340647 TMBIM6P55061 237 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 SSBP1Q04837 148 aaKnown RBP12.68□□□□□ -0.38
BRCC3-202ENST00000340647 OR52B4Q8NGK2 314 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 GLYATL2Q8WU03 294 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 RAB2BQ8WUD1 216 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 MISP3Q96FF7 219 aa12.68□□□□□ -0.38
BRCC3-202ENST00000340647 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
BRCC3-202ENST00000340647 LCE6AA0A183 80 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 H3BMQ9 156 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 TSPAN4O14817 238 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 CYB5BO43169 146 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 CDS2O95674 445 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
BRCC3-202ENST00000340647 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 AARDQ4LEZ3 155 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 Q56UQ5 140 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 ISOC1Q96CN7 298 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 OR10C1Q96KK4 312 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 NXF2Q9GZY0 626 aaKnown RBP12.67□□□□□ -0.38
BRCC3-202ENST00000340647 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 GPR132Q9UNW8 380 aa12.67□□□□□ -0.38
BRCC3-202ENST00000340647 C15orf62A8K5M9 175 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 ETV6P41212 452 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 MLANAQ16655 118 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 TMEM230Q96A57 120 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 BCL7BQ9BQE9 202 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 FNDC4Q9H6D8 234 aaPredicted RBP12.66□□□□□ -0.38
BRCC3-202ENST00000340647 UBQLN2Q9UHD9 624 aa12.66□□□□□ -0.38
BRCC3-202ENST00000340647 CHEK1O14757 476 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 MFAP4P55083 255 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 MRPS10P82664 201 aaKnown RBP12.65□□□□□ -0.38
BRCC3-202ENST00000340647 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
BRCC3-202ENST00000340647 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
BRCC3-202ENST00000340647 RNF2Q99496 336 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 TXN2Q99757 166 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
BRCC3-202ENST00000340647 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 COPZ2Q9P299 210 aa12.65□□□□□ -0.38
BRCC3-202ENST00000340647 IGHV3-49A0A0A0MS15 119 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 IGHV7-4-1A0A0J9YVY3 117 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 ANKRD20A5PA0PJZ0 165 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 GSTZ1O43708 216 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-202ENST00000340647 TNFSF8P32971 234 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 AKR1C2P52895 323 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 ERHP84090 104 aaKnown RBP12.64□□□□□ -0.39
BRCC3-202ENST00000340647 IL18Q14116 193 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
BRCC3-202ENST00000340647 NAA60Q9H7X0 242 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
BRCC3-202ENST00000340647 TEX13DA0A0J9YY54 714 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-202ENST00000340647 CRYM-AS1A6NIL9 109 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
BRCC3-202ENST00000340647 AKAIN1P0CW23 69 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
BRCC3-202ENST00000340647 MEF2DQ14814 521 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 TRIM16LQ309B1 348 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 ANKRD55Q3KP44 614 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 TOMM20LQ6UXN7 152 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 CCDC71LQ8N9Z2 235 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 OR51S1Q8NGJ8 323 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 GPR146Q96CH1 333 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 GGTLC1Q9BX51 225 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 PRR13Q9NZ81 148 aa12.63□□□□□ -0.39
BRCC3-202ENST00000340647 AGRNO00468 2067 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 IGHV3OR16-13A0A075B7E8 117 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 LOC102724200A0A096LPH7 203 aaPredicted RBP12.62□□□□□ -0.39
BRCC3-202ENST00000340647 IGHV3-74A0A0B4J1X5 117 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 A0A1B0GU03 582 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
BRCC3-202ENST00000340647 TMEM50AO95807 157 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
BRCC3-202ENST00000340647 ZNF124Q15973 351 aa12.62□□□□□ -0.39
BRCC3-202ENST00000340647 ALMS1Q8TCU4 4167 aa12.61□□□□□ -0.39
BRCC3-202ENST00000340647 IFNA17P01571 189 aa12.61□□□□□ -0.39
BRCC3-202ENST00000340647 SUPT4H1P63272 117 aaKnown RBP12.61□□□□□ -0.39
BRCC3-202ENST00000340647 EWSR1Q01844 656 aaKnown RBP eCLIP12.61□□□□□ -0.39
BRCC3-202ENST00000340647 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-202ENST00000340647 SLC35G3Q8N808 338 aa12.61□□□□□ -0.39
BRCC3-202ENST00000340647 TMEM116Q8NCL8 245 aa12.61□□□□□ -0.39
BRCC3-202ENST00000340647 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
BRCC3-202ENST00000340647 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
BRCC3-202ENST00000340647 DISC1C4P0D8 188 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 B3GALNT1O75752 331 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 TMEM187Q14656 261 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms