RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ARHGAP32A7KAX9 2087 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 TGOLN2O43493 480 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 LINC00869P0C866 280 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 SSBP2P81877 361 aaPredicted RBP9.37□□□□□ -0.91
PTPN2-201ENST00000309660 POU2AF1Q16633 256 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
PTPN2-201ENST00000309660 K7ENP7 123 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 OR5G3P0C626 314 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 S100A12P80511 92 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PRR20EP86478 221 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PRR20CP86479 221 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PRR20DP86480 221 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PRR20BP86481 221 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PRR20AP86496 221 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 ASPHD1Q5U4P2 390 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 SLC45A2Q9UMX9 530 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 CASP6P55212 293 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 LGALS4P56470 323 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF90Q03938 601 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 OR10G8Q8NGN5 311 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 CACNA1BQ00975 2339 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
PTPN2-201ENST00000309660 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
PTPN2-201ENST00000309660 SLC35B1P78383 322 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 CD69Q07108 199 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 WASHC3Q9Y3C0 194 aa9.36□□□□□ -0.91
PTPN2-201ENST00000309660 A0A1B0GUS0 222 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 CCL21O00585 134 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 USF1P22415 310 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 APOBEC3AP31941 199 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 TNXAQ16473 311 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 DMRTC2Q8IXT2 367 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 CNTFRP26992 372 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 MUC15Q8N387 334 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 OR1P1Q8NH06 330 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 IGFBPL1Q8WX77 278 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 TMEM186Q96B77 213 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 A0A1W2PRD5 423 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 A0A1W2PRF3 423 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 A0A1W2PRM7 423 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF705GA8MUZ8 300 aaPredicted RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 MOSP00540 346 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 SRP14P37108 136 aaKnown RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 TCL1AP56279 114 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
PTPN2-201ENST00000309660 FXYD3Q14802 87 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 TMEM30BQ3MIR4 351 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 VMA21Q3ZAQ7 101 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 PQLC2Q6ZP29 291 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 NDUFA4L2Q9NRX3 87 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 SERTAD4Q9NUC0 356 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 JKAMPQ9P055 326 aa9.35□□□□□ -0.91
PTPN2-201ENST00000309660 DLL1O00548 723 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 COX7A2P2O60397 106 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 PYYP10082 97 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 ORM2P19652 201 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 GNG4P50150 75 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 VSTM2AQ8TAG5 236 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
PTPN2-201ENST00000309660 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 ZNF835Q9Y2P0 537 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 HELTA6NFD8 242 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 PLGLAQ15195 96 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 CENPWQ5EE01 88 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 OR5AU1Q8NGC0 362 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
PTPN2-201ENST00000309660 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 K7EN84 100 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 PHOX2AO14813 284 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 GGCTO75223 188 aaKnown RBP9.33□□□□□ -0.92
PTPN2-201ENST00000309660 CBLN1P23435 193 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TAS2R45P59539 299 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM177Q53S58 311 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 VKORC1Q9BQB6 163 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 ONECUT1Q9UBC0 465 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 INSIG2Q9Y5U4 225 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 TMEM155Q4W5P6 130 aa9.33□□□□□ -0.92
PTPN2-201ENST00000309660 MRPL41Q8IXM3 137 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms