RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 INS-IGF2F8WCM5 200 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 CREBL2O60519 120 aaPredicted RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 PRAF2O60831 178 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SNAPC5O75971 98 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 NDUFB8O95169 186 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 BRI3O95415 125 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SIX6O95475 246 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 TMEM50AO95807 157 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 ELANEP08246 267 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 OR13C7P0DN81 318 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RNASE2P10153 161 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 SLC25A6P12236 298 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RAB9AP51151 201 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RPL23AP62750 156 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 TNFRSF9Q07011 255 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 IL15RAQ13261 267 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RGS21Q2M5E4 152 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 CXorf66Q5JRM2 361 aaPredicted RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 TOR2AQ5JU69 321 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 PVRIGQ6DKI7 326 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 TEX38Q6PEX7 206 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 C12orf54Q6X4T0 127 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 ZNF491Q8N8L2 437 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 OR5B3Q8NH48 314 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 OR52E5Q8NH55 327 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 COQ8AQ8NI60 647 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RNASE11Q8TAA1 199 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 RRNAD1Q96FB5 475 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 MS4A10Q96PG2 267 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 P2RX4Q99571 388 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 PHB2Q99623 299 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SPIN2AQ99865 258 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SPIN2BQ9BPZ2 258 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 SRSF8Q9BRL6 282 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 HINT2Q9BX68 163 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 COMMD5Q9GZQ3 224 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 RBKSQ9H477 322 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 C11orf1Q9H5F2 150 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 RCL1Q9Y2P8 373 aaKnown RBP4.56□□□□□ -1.68
SSX3-201ENST00000298396 TMED3Q9Y3Q3 217 aa4.56□□□□□ -1.68
SSX3-201ENST00000298396 A0A1W2PRX2 142 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 TCRBV4S1A1TA0A5B7 111 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 MFSD2BA6NFX1 497 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 H3BUA1 57 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 I3L521 148 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 K7EIM0 57 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 OR2J3O76001 311 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 ACTL6BO94805 426 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 ATG12O94817 140 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 TRBV12-3P01733 135 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 MBPP02686 304 aaPredicted RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 TRGV3P03979 118 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 PF4V1P10720 104 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 CXCL3P19876 107 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 PAX9P55771 341 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 H2BFSP57053 126 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 SPCS3P61009 180 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 SLC35B1P78383 322 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 TMEM267Q0VDI3 215 aaPredicted RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 IAH1Q2TAA2 248 aaPredicted RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 DEFB136Q30KP8 78 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 NSUN5P1Q3KNT7 163 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 THOC7Q6I9Y2 204 aaKnown RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 C3orf56Q8N813 242 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 ZBTB8BQ8NAP8 495 aaPredicted RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 ZNF114Q8NC26 417 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 OR5M8Q8NGP6 311 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 OR1S1Q8NH92 325 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 TMEM68Q96MH6 324 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 OR4C12Q96R67 309 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 MAGT1Q9H0U3 335 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 FKBP11Q9NYL4 201 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 S4R3C0 116 aa4.55□□□□□ -1.68
SSX3-201ENST00000298396 PRKDCP78527 4128 aaKnown RBP4.55□□□□□ -1.68
SSX3-201ENST00000298396 IGHV3-21A0A0B4J1V1 117 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 C15orf62A8K5M9 175 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 FAM90A26D6RGX4 464 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 PRSS46E5RG02 174 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 I3L2K1 104 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 GOSR2O14653 212 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 CCNKO75909 580 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 DHFRP00374 187 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 IFNA17P01571 189 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 IGHV3-23P01764 117 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 IAPPP10997 89 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 CDX1P47902 265 aaPredicted RBP4.54□□□□□ -1.68
SSX3-201ENST00000298396 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
SSX3-201ENST00000298396 TPPP2P59282 170 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 POLR2GP62487 172 aaKnown RBP eCLIP4.54□□□□□ -1.68
SSX3-201ENST00000298396 RHOGP84095 191 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 RUNX1Q01196 453 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 FCN2Q15485 313 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 NDUFA11Q86Y39 141 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 COMMD1Q8N668 190 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 UXS1Q8NBZ7 420 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 OR11H7Q8NGC8 314 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms