RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ITFG2Q969R8 447 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 HDHD2Q9H0R4 259 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 EFCAB1Q9HAE3 211 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 TREM1Q9NP99 234 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 PLAC8Q9NZF1 115 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 DKKL1Q9UK85 242 aa0.08□□□□□ -2.4
SRP54-214ENST00000630962 AHNAKQ09666 5890 aaKnown RBP0.08□□□□□ -2.4
SRP54-214ENST00000630962 TNRC6AQ8NDV7 1962 aaKnown RBP0.07□□□□□ -2.4
SRP54-214ENST00000630962 C2orf70A6NJV1 201 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 BIRC5O15392 142 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 HLA-DRAP01903 254 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 RD3LP0DJH9 198 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 COX6A1P12074 109 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 MYL12AP19105 171 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 CLDN12P56749 244 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 PMS2P3Q13401 168 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 MPV17LQ2QL34 196 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 SPANXN3Q5MJ09 141 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 DPPA3Q6W0C5 159 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 SYCE1Q8N0S2 351 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 KCTD7Q96MP8 289 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 TAS2R4Q9NYW5 299 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 NAV3Q8IVL0 2385 aa0.07□□□□□ -2.4
SRP54-214ENST00000630962 EML6Q6ZMW3 1958 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 DCCP43146 1447 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 UCHL3P15374 230 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 UGT2B7P16662 529 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 CASQ1P31415 396 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 IQCF2Q8IXL9 164 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 OR4E2Q8NGC2 313 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 ZNF75CPQ92670 426 aaPredicted RBP0.06□□□□□ -2.4
SRP54-214ENST00000630962 RAD50Q92878 1312 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 MTUS2Q5JR59 1369 aa0.06□□□□□ -2.4
SRP54-214ENST00000630962 FRAS1Q86XX4 4008 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 ERICH2A1L162 156 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 SMLR1H3BR10 107 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 OR2B3O76000 313 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 CTSDP07339 412 aaPredicted RBP0.05□□□□□ -2.4
SRP54-214ENST00000630962 CCL1P22362 96 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 CST9Q5W186 159 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 RPL22L1Q6P5R6 122 aaKnown RBP0.05□□□□□ -2.4
SRP54-214ENST00000630962 SOSTDC1Q6X4U4 206 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 TMEM161BQ8NDZ6 487 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 PFN4Q8NHR9 129 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 SFT2D1Q8WV19 159 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 GINS4Q9BRT9 223 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 ULBP3Q9BZM4 244 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 COMMD5Q9GZQ3 224 aa0.05□□□□□ -2.4
SRP54-214ENST00000630962 FAT4Q6V0I7 4981 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 TRPC5OSA6NMA1 111 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 PROSCO94903 275 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 UBL3O95164 117 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 FAM228BP0C875 321 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 FKBP2P26885 142 aaKnown RBP0.04□□□□□ -2.4
SRP54-214ENST00000630962 HADHBP55084 474 aaKnown RBP0.04□□□□□ -2.4
SRP54-214ENST00000630962 CLEC6AQ6EIG7 209 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 Q6ZQT0 140 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 OPTNQ96CV9 577 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 DIRAS2Q96HU8 199 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 CNBD2Q96M20 576 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 MAST2Q6P0Q8 1798 aa0.04□□□□□ -2.4
SRP54-214ENST00000630962 CACNA1EQ15878 2313 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 TRBV20OR9-2A0A075B6H5 130 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 TRBV6-8A0A0A6YYG3 113 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 HSBP1L1C9JCN9 74 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 KMT2DO14686 5537 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 ACOX3O15254 700 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 TCL1BO95988 128 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 APOEP02649 317 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 PPP1R1AQ13522 171 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 GRK1Q15835 563 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 GKN2Q86XP6 184 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 DEFB125Q8N687 156 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 OR2T4Q8NH00 348 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 NHP2Q9NX24 153 aaKnown RBP0.03□□□□□ -2.4
SRP54-214ENST00000630962 C15orf41Q9Y2V0 281 aa0.03□□□□□ -2.4
SRP54-214ENST00000630962 TOPBP1Q92547 1522 aa0.03□□□□□ -2.41
SRP54-214ENST00000630962 IQCF5A8MTL0 148 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 SPI1P17947 270 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BOP23527 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BBP33778 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 MARCKSL1P49006 195 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 MAP3K7CLP57077 242 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BDP58876 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BCP62807 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 RHEBQ15382 184 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST2H2BEQ16778 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 COQ5Q5HYK3 327 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.02□□□□□ -2.41
SRP54-214ENST00000630962 AADACL3Q5VUY0 350 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 TMEM156Q8N614 296 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BHQ93079 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BNQ99877 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 HIST1H2BMQ99879 126 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 PRRT1Q99946 306 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 DERL1Q9BUN8 251 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 ABCC11Q96J66 1382 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 MED12Q93074 2177 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 ZNF462Q96JM2 2506 aa0.02□□□□□ -2.41
SRP54-214ENST00000630962 TRAV12-1A0A0B4J245 112 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms