RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KIR3DL3Q8N743 410 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 RNF5Q99942 180 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 TMPRSS5Q9H3S3 457 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 SIGLEC9Q9Y336 463 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 M0R036 132 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 CACNA1BQ00975 2339 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 TMEM144Q7Z5S9 345 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 SSMEM1Q8WWF3 244 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 P2RX4Q99571 388 aa15.31■□□□□ 0.04
PSPC1-206ENST00000619300 ODF3BA8MYP8 253 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 DEFA4P12838 97 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 CEACAM3P40198 252 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 RPL29P47914 159 aaKnown RBP15.3■□□□□ 0.04
PSPC1-206ENST00000619300 SUB1P53999 127 aaKnown RBP eCLIP15.3■□□□□ 0.04
PSPC1-206ENST00000619300 CD69Q07108 199 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 KLRD1Q13241 179 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 AKIRIN2Q53H80 203 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 AWAT1Q58HT5 328 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 CACNG8Q8WXS5 425 aa15.3■□□□□ 0.04
PSPC1-206ENST00000619300 PUS1Q9Y606 427 aaKnown RBP eCLIP15.3■□□□□ 0.04
PSPC1-206ENST00000619300 A0A1W2PPV4 95 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 MAS1LP35410 378 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 GPX4P36969 197 aaPredicted RBP15.29■□□□□ 0.04
PSPC1-206ENST00000619300 B2MP61769 119 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 GAMTQ14353 236 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 MLANAQ16655 118 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 SLC35E3Q7Z769 313 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 RPS10P5Q9NQ39 176 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 C7orf77A4D0Y5 90 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 TIMM23O14925 209 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 ACTL6BO94805 426 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 SNRNP70P08621 437 aaKnown RBP15.29■□□□□ 0.04
PSPC1-206ENST00000619300 TMEM249Q2WGJ8 235 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 STPG3Q8N7X2 389 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 C20orf24Q9BUV8 137 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 METTL1Q9UBP6 276 aaKnown RBP15.29■□□□□ 0.04
PSPC1-206ENST00000619300 ARHGAP32A7KAX9 2087 aa15.29■□□□□ 0.04
PSPC1-206ENST00000619300 TACC2O95359 2948 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 USP24Q9UPU5 2620 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 H3BQ15 152 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
PSPC1-206ENST00000619300 PSMB3P49720 205 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 PAX2Q02962 417 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 VMO1Q7Z5L0 202 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 PPP1R27Q86WC6 154 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 RNASEH2CQ8TDP1 164 aaKnown RBP15.28■□□□□ 0.04
PSPC1-206ENST00000619300 IGFBPL1Q8WX77 278 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 BPESC1Q9GZL8 116 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 SMCO4Q9NRQ5 59 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 HILPDAQ9Y5L2 63 aa15.28■□□□□ 0.04
PSPC1-206ENST00000619300 LMO4P61968 165 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 LCN2P80188 198 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 FLI1Q01543 452 aaPredicted RBP15.27■□□□□ 0.04
PSPC1-206ENST00000619300 TNXAQ16473 311 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 LHFPL4Q7Z7J7 247 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 MRPL41Q8IXM3 137 aaKnown RBP15.27■□□□□ 0.04
PSPC1-206ENST00000619300 MANBALQ9NQG1 85 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 SLC45A2Q9UMX9 530 aa15.27■□□□□ 0.04
PSPC1-206ENST00000619300 VENTXO95231 258 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 IGHV4-39P01824 125 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRB1P04280 392 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 AKR1C3P42330 323 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 RPL27AP46776 148 aaKnown RBP15.27■□□□□ 0.03
PSPC1-206ENST00000619300 COMPP49747 757 aaPredicted RBP15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRR20EP86478 221 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRR20CP86479 221 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRR20DP86480 221 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRR20BP86481 221 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 PRR20AP86496 221 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 RHEBQ15382 184 aa15.27■□□□□ 0.03
PSPC1-206ENST00000619300 IGKV1OR2-108A0A075B7D4 117 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 IGLC7A0M8Q6 106 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 LINC00869P0C866 280 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 RNF224P0DH78 156 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 MEF2BQ02080 365 aaPredicted RBP15.26■□□□□ 0.03
PSPC1-206ENST00000619300 HABP2Q14520 560 aaPredicted RBP15.26■□□□□ 0.03
PSPC1-206ENST00000619300 FAM90A2PQ658T7 463 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 SLC16A13Q7RTY0 426 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 CFHR4Q92496 578 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 BBC3Q96PG8 261 aaPredicted RBP15.26■□□□□ 0.03
PSPC1-206ENST00000619300 NIPSNAP3BQ9BS92 247 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 FBXL15Q9H469 300 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 CD81P60033 236 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 SIRPDQ9H106 197 aa15.26■□□□□ 0.03
PSPC1-206ENST00000619300 IGHV2-70DA0A0C4DH43 119 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 A0A1W2PRD5 423 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 A0A1W2PRF3 423 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 A0A1W2PRM7 423 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 PDLIM4P50479 330 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 OR2T6Q8NHC8 308 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 GATAD1Q8WUU5 269 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 SLC35E1Q96K37 410 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 SPOCK3Q9BQ16 436 aa15.25■□□□□ 0.03
PSPC1-206ENST00000619300 KLF2Q9Y5W3 355 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-206ENST00000619300 SPTAN1Q13813 2472 aaKnown RBP15.25■□□□□ 0.03
PSPC1-206ENST00000619300 REG1AP05451 166 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 HOXB4P17483 251 aaPredicted RBP15.24■□□□□ 0.03
PSPC1-206ENST00000619300 GNB1P62873 340 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 ABHD5Q8WTS1 349 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 NDUFS6O75380 124 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms