RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 KLF14Q8TD94 323 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-217ENST00000602723 AGRNO00468 2067 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 C9JCJ5 164 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 TGFAP01135 160 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 STARD6P59095 220 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-217ENST00000602723 CYP2G1PQ6ZSU1 146 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 ABHD12Q8N2K0 398 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 IGHMP01871 453 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
CSMD1-217ENST00000602723 KIF26AQ9ULI4 1882 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-217ENST00000602723 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ACSF3Q4G176 576 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-217ENST00000602723 DRAM1Q8N682 238 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-217ENST00000602723 FRMPD3Q5JV73 1810 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ADAMTS7Q9UKP4 1686 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 UCP3P55916 312 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 TTC9CQ8N5M4 171 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 HIGD1CA8MV81 97 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ASIPP42127 132 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 LINC00469Q8N7U9 141 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 AHRRA9YTQ3 701 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 GPR183P32249 361 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 TFF3Q07654 80 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 TEX29Q8N6K0 151 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 LRTM2Q8N967 370 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 GATAD1Q8WUU5 269 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 NPIPB3Q92617 1050 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 RNF115Q9Y4L5 304 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 DCTN5Q9BTE1 182 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 LOC105371242A0A075B767 164 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 APOMO95445 188 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 PPIAL4GP0DN37 164 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ICAM4Q14773 271 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 PCSK4Q6UW60 755 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 TMEM186Q96B77 213 aa8.17□□□□□ -1.1
CSMD1-217ENST00000602723 IL6RP08887 468 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-217ENST00000602723 ZNF729A6NN14 1252 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 RAMP1O60894 148 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 CNTFRP26992 372 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 SLC22A18ASQ8N1D0 253 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 WBP1LQ9NX94 342 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 NLRC5Q86WI3 1866 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 LOC101059948A0A1B0GTJ6 334 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 PGPEP1LA6NFU8 196 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 MUC6Q6W4X9 2439 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 CGAP01215 116 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 Q6AWC8 147 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 UNQ9370/PRO34162Q6UXP9 181 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 ZNF501Q96CX3 271 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 WDYHV1Q96HA8 205 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 SRXN1Q9BYN0 137 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 CHODLQ9H9P2 273 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 PRRC2AP48634 2157 aaKnown RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 IGHV3OR16-13A0A075B7E8 117 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 IGHV3-74A0A0B4J1X5 117 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 CIARTQ8N365 385 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 OR5P3Q8WZ94 311 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 SPAARA0A1B0GVQ0 90 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 LY6EQ16553 131 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 WFDC6Q9BQY6 131 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 ANAPC13Q9BS18 74 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 PCNX3Q9H6A9 2034 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-217ENST00000602723 EGR1P18146 543 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 PSMG4Q5JS54 123 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 DNM1P46Q6ZS02 220 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 IGHV3-35A0A0C4DH35 117 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 IZUMO1RA6ND01 250 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 CKS1BP61024 79 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 FAM181AQ8N9Y4 354 aa8.16□□□□□ -1.1
CSMD1-217ENST00000602723 SIP14410 1827 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 PNKDQ8N490 385 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 PRDM13Q9H4Q3 707 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 IGHV3-49A0A0A0MS15 119 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 NRN1Q9NPD7 142 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 PIN1P1O15428 100 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 IGHV4-39P01824 125 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 ELOVL5Q9NYP7 299 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 LOC390937A0A1W2PQ73 354 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 SFTPCP11686 197 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 NUTF2P61970 127 aaKnown RBP8.15□□□□□ -1.1
CSMD1-217ENST00000602723 SMRP1Q8NCR6 262 aa8.15□□□□□ -1.1
CSMD1-217ENST00000602723 OR2K2Q8NGT1 345 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms