RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 SIRT7Q9NRC8 400 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 HIF1ANQ9NWT6 349 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 FBXO7Q9Y3I1 522 aa7.55□□□□□ -1.2
VPS25-205ENST00000590339 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
VPS25-205ENST00000590339 MPDU1O75352 247 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 CA2P00918 260 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 IFNA10P01566 189 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 MSMBP08118 114 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 FGF7P21781 194 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 DVL1P1P54792 670 aaPredicted RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 RPS16P62249 146 aaKnown RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 ARF6P62330 175 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 RAB11AP62491 216 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 PRB3Q04118 309 aaPredicted RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 KLRD1Q13241 179 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 ZNF726P1Q15940 193 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 C2orf83Q53S99 150 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 TMEM41BQ5BJD5 291 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 ACSM6Q6P461 480 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 OR1L8Q8NGR8 309 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 MBD3L1Q8WWY6 194 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 TMEM158Q8WZ71 300 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 RPEQ96AT9 228 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 RNF5Q99942 180 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 NPCDR1Q9BY65 106 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 ZNF430Q9H8G1 570 aaPredicted RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 ENY2Q9NPA8 101 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 RPRMQ9NS64 109 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 KIAA1456Q9P272 454 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 DPM3Q9P2X0 92 aa7.54□□□□□ -1.2
VPS25-205ENST00000590339 LSM4Q9Y4Z0 139 aaKnown RBP7.54□□□□□ -1.2
VPS25-205ENST00000590339 IGHV3-72A0A0B4J1Y9 119 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 A0A1W2PN81 502 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 OOSP1A8MZH6 123 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 RNASEK-C17orf49H0YIS7 233 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 SLC25A17O43808 307 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 SOX15O60248 233 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 IGKV1-33P01594 117 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 HBE1P02100 147 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 H2AFB1P0C5Y9 115 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 HTR1DP28221 377 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 CD1BP29016 333 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 CHRNA7P36544 502 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 PSG5Q15238 335 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 SSX7Q7RTT5 188 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
VPS25-205ENST00000590339 RITA1Q96K30 269 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 COMMD5Q9GZQ3 224 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 VSIRQ9H7M9 311 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 INSIG2Q9Y5U4 225 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 TNCP24821 2201 aa7.53□□□□□ -1.2
VPS25-205ENST00000590339 ARHGAP32A7KAX9 2087 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 C9JQL5 133 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 E7EUB6 86 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 TIMM23O14925 209 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 AGPAT2O15120 278 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 FOXH1O75593 365 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 VENTXO95231 258 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 CNTFRP26992 372 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 MAS1LP35410 378 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 CEACAM3P40198 252 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 RAB2AP61019 212 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 LCN2P80188 198 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 AKR1C1Q04828 323 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 PRSS8Q16651 343 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 GUK1Q16774 197 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
VPS25-205ENST00000590339 C10orf55Q5SWW7 151 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 MINOS1Q5TGZ0 78 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 MOB3BQ86TA1 216 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 MMD2Q8IY49 270 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 SPATA3Q8NHX4 192 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 TBX15Q96SF7 602 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 GGTLC1Q9BX51 225 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 SEC11CQ9BY50 192 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 TREM1Q9NP99 234 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 MINOS1-NBL1R4GNA1 71 aa7.52□□□□□ -1.21
VPS25-205ENST00000590339 IGLC7A0M8Q6 106 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 SEC14L6B5MCN3 397 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 C17orf112F2Z3M2 114 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 NDUFA3O95167 84 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 MBP02144 154 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 IFNA4P05014 189 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms