RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 C2orf68Q2NKX9 166 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 RNF152Q8N8N0 203 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 RBKSQ9H477 322 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 SLA2Q9H6Q3 261 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
RPRD1A-208ENST00000589050 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 SHISA2Q6UWI4 295 aa12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 ZBTB8BQ8NAP8 495 aaPredicted RBP12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 OR4D5Q8NGN0 318 aa12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
RPRD1A-208ENST00000589050 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 BRI3O95415 125 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 SNCAP37840 140 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 NKX2-1P43699 371 aaPredicted RBP12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 DEFA5Q01523 94 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 DTD1Q8TEA8 209 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 MAGT1Q9H0U3 335 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 HIPK2Q9H2X6 1198 aa12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 TSSC4Q9Y5U2 329 aaPredicted RBP12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
RPRD1A-208ENST00000589050 CYB5BO43169 146 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 MED6O75586 246 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 SIX6O95475 246 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 RPL23AP62750 156 aaKnown RBP12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 RHOGP84095 191 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 ZNF491Q8N8L2 437 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 MYOZ3Q8TDC0 251 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 FANCD2OSQ96PS1 177 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 P2RX4Q99571 388 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
RPRD1A-208ENST00000589050 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 FAM223BA6NKX1 122 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 WRBO00258 174 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 SYNGR2O43760 224 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 OR2J3O76001 311 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 IAPPP10997 89 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 ID3Q02535 119 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 KIAA0141Q14154 515 aaPredicted RBP12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 FAM223AQ8IWN6 122 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 ZNF114Q8NC26 417 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 OR1L6Q8NGR2 347 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 OR1P1Q8NH06 330 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 MED28Q9H204 178 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 DMRT1Q9Y5R6 373 aa12.03□□□□□ -0.48
RPRD1A-208ENST00000589050 PLXNB1O43157 2135 aa12.02□□□□□ -0.48
RPRD1A-208ENST00000589050 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 NUDT19A8MXV4 375 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 SSSCA1O60232 199 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 RNASE2P10153 161 aaKnown RBP12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 HTR2BP41595 481 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 SUB1P53999 127 aaKnown RBP eCLIP12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 MFAP2P55001 183 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 KLK9Q2XQG4 91 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 C18orf65Q6ZTR6 163 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 SPATA3Q8NHX4 192 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 USMG5Q96IX5 58 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 UBE2E2Q96LR5 201 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 GNB4Q9HAV0 340 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 THYN1Q9P016 225 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.49
RPRD1A-208ENST00000589050 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 NDUFB8O95169 186 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 IFNA10P01566 189 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 MBPP02686 304 aaPredicted RBP12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 H2BFSP57053 126 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 FCN2Q15485 313 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 KLHL30-AS1Q8NEE0 82 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 CIB3Q96Q77 187 aaPredicted RBP12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 OR5B12Q96R08 314 aa12.01□□□□□ -0.49
RPRD1A-208ENST00000589050 NPY1RP25929 384 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 S100A10P60903 97 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 BSXQ3C1V8 233 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 C4orf3Q8WVX3 66 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 NMES1Q9C002 83 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 RCL1Q9Y2P8 373 aaKnown RBP12□□□□□ -0.49
RPRD1A-208ENST00000589050 LSM5Q9Y4Y9 91 aaKnown RBP12□□□□□ -0.49
RPRD1A-208ENST00000589050 U3KQ87 197 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 TNCP24821 2201 aa12□□□□□ -0.49
RPRD1A-208ENST00000589050 LY86O95711 162 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms