RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CMTM5Q96DZ9 223 aa0.57□□□□□ -2.32
SMCHD1-207ENST00000581711 HDHD2Q9H0R4 259 aa0.57□□□□□ -2.32
SMCHD1-207ENST00000581711 EFCAB1Q9HAE3 211 aa0.57□□□□□ -2.32
SMCHD1-207ENST00000581711 EIF4G1Q04637 1599 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-207ENST00000581711 HIVEP3Q5T1R4 2406 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 IGKV1D-42A0A075B6H8 117 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 C1QAP02745 245 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 PRM2P04554 102 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 NFYAP23511 347 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 ZNF80P51504 273 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 SYPL2Q5VXT5 272 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 DEFB125Q8N687 156 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 OR2T4Q8NH00 348 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 OR4C6Q8NH72 309 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 CFAP53Q96M91 514 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 LAMA4Q16363 1823 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 ABCA13Q86UQ4 5058 aa0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 ASH1LQ9NR48 2969 aaKnown RBP0.56□□□□□ -2.32
SMCHD1-207ENST00000581711 A0A0J9YY10 115 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 LINC00854A0A1B0GVQ3 168 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 A0A1B0GX78 115 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 FABP5P3A8MUU1 101 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 INMT-MINDY4F8WBC2 141 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 RPS12P25398 132 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 FKBP2P26885 142 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 ZNF93P35789 620 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 GUK1Q16774 197 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 TMEM156Q8N614 296 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 KLK6Q92876 244 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 TMEM106AQ96A25 262 aa0.55□□□□□ -2.32
SMCHD1-207ENST00000581711 ABCA12Q86UK0 2595 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 EML6Q6ZMW3 1958 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 C19orf84I3L1E1 186 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 M0QX08 132 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 CXCR6O00574 342 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 FADS1O60427 444 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 COQ5Q5HYK3 327 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 GLT8D1Q68CQ7 371 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 C11orf40Q8WZ69 217 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 CNBD2Q96M20 576 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 MRPL57Q9BQC6 102 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 ZFP30Q9Y2G7 519 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 FLNAP21333 2647 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 HERC1Q15751 4861 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 SONP18583 2426 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-207ENST00000581711 HECTD1Q9ULT8 2610 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 TRBV20OR9-2A0A075B6H5 130 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 A0A087WX48 190 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 ACOX3O15254 700 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 OR5F1O95221 314 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 C8orf88P0DMB2 117 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 CRYGAP11844 174 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 BATFQ16520 125 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 CLVS2Q5SYC1 327 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 AADACL3Q5VUY0 350 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 OR51D1Q8NGF3 324 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 SLC50A1Q9BRV3 221 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 FAM96AQ9H5X1 160 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 C3orf18Q9UK00 162 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
SMCHD1-207ENST00000581711 NAV2Q8IVL1 2488 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 H0Y980 276 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 M0QZ92 97 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 CTSDP07339 412 aaPredicted RBP0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 SPI1P17947 270 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 BRS3P32247 399 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 CAV1Q03135 178 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 DMTNQ08495 405 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 IBA57Q5T440 356 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 Q6ZQT0 140 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 DERL1Q9BUN8 251 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 OR51I1Q9H343 314 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 TP73-AS1Q9UF72 201 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 ABCC11Q96J66 1382 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 DOPEY1Q5JWR5 2465 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 PIEZO1Q92508 2521 aa0.52□□□□□ -2.33
SMCHD1-207ENST00000581711 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 EPPK1P58107 5090 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 SSPOA2VEC9 5147 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 LOC110117498A0A087WWA1 95 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 ASAH2BP0C7U1 165 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 CASQ1P31415 396 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 CD151P48509 253 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 MARCKSL1P49006 195 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 NAA20P61599 178 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 CCL20P78556 96 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 GRK1Q15835 563 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 PDPK2PQ6A1A2 396 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 SFXN4Q6P4A7 337 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 ZNF826PQ6ZT77 177 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 BPIFA4PQ86YQ2 179 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 LINC00471Q8N535 108 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 RASSF5Q8WWW0 418 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 RAB8BQ92930 207 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 XPNPEP1Q9NQW7 623 aa0.51□□□□□ -2.33
SMCHD1-207ENST00000581711 NSD1Q96L73 2696 aaPredicted RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms