RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CCDC144NLQ6NUI1 221 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 C1orf159Q96HA4 380 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 APOC3P02656 99 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 WT1-ASQ06250 92 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 CLEC2AQ6UVW9 174 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 PPP1R27Q86WC6 154 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 RPP25LQ8N5L8 163 aaKnown RBP22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 TBX15Q96SF7 602 aa22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 TBL2Q9Y4P3 447 aaKnown RBP22.79■■□□□ 1.24
CTDNEP1-210ENST00000574322 C9JQL5 133 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 IGKV1D-33P01593 117 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 IGKV1-33P01594 117 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 OPRK1P41145 380 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 UBE2E1P51965 193 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 ELLP55199 621 aaPredicted RBP22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 MBD6Q96DN6 1003 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 HILPDAQ9Y5L2 63 aa22.78■■□□□ 1.24
CTDNEP1-210ENST00000574322 FFAR4Q5NUL3 377 aa22.77■■□□□ 1.24
CTDNEP1-210ENST00000574322 C10orf55Q5SWW7 151 aa22.77■■□□□ 1.24
CTDNEP1-210ENST00000574322 MRPL41Q8IXM3 137 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-210ENST00000574322 METTL1Q9UBP6 276 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-210ENST00000574322 SMCO3A2RU48 225 aa22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 COMPP49747 757 aaPredicted RBP22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 PMS2P11Q13670 270 aa22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 NPBQ8NG41 125 aa22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 CACNG8Q8WXS5 425 aa22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 MGST2Q99735 147 aa22.77■■□□□ 1.23
CTDNEP1-210ENST00000574322 ANKRD17O75179 2603 aaKnown RBP22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 F8W036 122 aa22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 PVRIGQ6DKI7 326 aa22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 TEPPQ6URK8 271 aa22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 EIF5A2Q9GZV4 153 aaKnown RBP22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 KCNIP2Q9NS61 270 aa22.76■■□□□ 1.23
CTDNEP1-210ENST00000574322 IGHV4-61A0A0C4DH41 118 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 MOSP00540 346 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 SFTA3P0C7M3 94 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 M6PRP20645 277 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 GPX4P36969 197 aaPredicted RBP22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 RPL27AP46776 148 aaKnown RBP22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 SUB1P53999 127 aaKnown RBP eCLIP22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 LGALS4P56470 323 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 DSCR9P59020 149 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 SSX7Q7RTT5 188 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 RNASEH2CQ8TDP1 164 aaKnown RBP22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 GGTLC1Q9BX51 225 aa22.75■■□□□ 1.23
CTDNEP1-210ENST00000574322 A0A1B0GV50 99 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 RBFOX3A6NFN3 312 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 NDUFA3O95167 84 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 CD69Q07108 199 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 EBI3Q14213 229 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 ACOT6Q3I5F7 207 aaPredicted RBP22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 TMEM144Q7Z5S9 345 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 ZNF114Q8NC26 417 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 OR10G4Q8NGN3 311 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 OR10G9Q8NGN4 311 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 OR10G7Q8NGN6 311 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 CSMD1Q96PZ7 3565 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 CTXND1A0A1B0GTU2 59 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 IGLC7A0M8Q6 106 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 ACTL6BO94805 426 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 PAX8Q06710 450 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 HNF4GQ14541 408 aa22.74■■□□□ 1.23
CTDNEP1-210ENST00000574322 NOTCH2Q04721 2471 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 OR13C7P0DN81 318 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 TNXAQ16473 311 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 LRRC75A-AS1Q8N1F1 130 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 SVBPQ8N300 66 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 MALSU1Q96EH3 234 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 FBXL15Q9H469 300 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 LPAR2Q9HBW0 351 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 SLC39A9Q9NUM3 307 aa22.73■■□□□ 1.23
CTDNEP1-210ENST00000574322 MAP1LC3B2A6NCE7 125 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 SEC14L6B5MCN3 397 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 SCO1O75880 301 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 RAB31Q13636 194 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 SSX2Q16385 188 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 ZNF506Q5JVG8 444 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 DYNAPQ8N1N2 210 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 OR2T10Q8NGZ9 312 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 EAF1Q96JC9 268 aaPredicted RBP22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 P2RX4Q99571 388 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 SRSF8Q9BRL6 282 aaKnown RBP22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 ACTR3CQ9C0K3 210 aaPredicted RBP22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 MAP1LC3BQ9GZQ8 125 aa22.72■■□□□ 1.23
CTDNEP1-210ENST00000574322 A0A1W2PRD5 423 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 A0A1W2PRF3 423 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 A0A1W2PRM7 423 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 NBR2O15453 112 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 SSBP2P81877 361 aaPredicted RBP22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 LCN15Q6UWW0 184 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 AJUBAQ96IF1 538 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 CYB5BO43169 146 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 RPL29P47914 159 aaKnown RBP22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 DEFA5Q01523 94 aa22.71■■□□□ 1.23
CTDNEP1-210ENST00000574322 IGHV4-30-2A0A087WSY4 118 aa22.7■■□□□ 1.22
CTDNEP1-210ENST00000574322 SNRNP70P08621 437 aaKnown RBP22.7■■□□□ 1.22
CTDNEP1-210ENST00000574322 GAMTQ14353 236 aa22.7■■□□□ 1.22
CTDNEP1-210ENST00000574322 MMDQ15546 238 aa22.7■■□□□ 1.22
CTDNEP1-210ENST00000574322 Q8N6K4 173 aa22.7■■□□□ 1.22
CTDNEP1-210ENST00000574322 RARRES2Q99969 163 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms