RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GINS1Q14691 196 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 HMGN3Q15651 99 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 FAM98BQ52LJ0 330 aaKnown RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 TMEM244Q5VVB8 128 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 NXNL2Q5VZ03 156 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 SIGIRRQ6IA17 410 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 RAB12Q6IQ22 244 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 FAAP20Q6NZ36 180 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 LRRTM1Q86UE6 522 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 SLC35F2Q8IXU6 374 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 Q8N814 137 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 DUSP18Q8NEJ0 188 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 NEK7Q8TDX7 302 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 FAM162AQ96A26 154 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 PTX4Q96A99 478 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 ORAI1Q96D31 301 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 DGCR14Q96DF8 476 aaKnown RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 PYURFQ96I23 114 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 NSL1Q96IY1 281 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 OR10C1Q96KK4 312 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 LINC00479Q96M42 142 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 CMTM3Q96MX0 182 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 C7orf26Q96N11 449 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 NIPSNAP1Q9BPW8 284 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 CHAC1Q9BUX1 264 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 VSIRQ9H7M9 311 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 ISG20L2Q9H9L3 353 aaKnown RBP2.44□□□□□ -2.02
HERC1-211ENST00000560983 IL36GQ9NZH8 169 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 KCNIP1Q9NZI2 227 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 LRRC42Q9Y546 428 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 V9GYQ6 96 aa2.44□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3OR16-12A0A075B7B8 117 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 TRAV14DV4A0A0A6YYC5 116 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 A0A1W2PQL4 384 aaPredicted RBP2.43□□□□□ -2.02
HERC1-211ENST00000560983 METTL15A6NJ78 407 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 H3BMM0 161 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 M0R1X1 148 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 TNFRSF11BO00300 401 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 SIVA1O15304 175 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 NUPL2O15504 423 aaKnown RBP2.43□□□□□ -2.02
HERC1-211ENST00000560983 SULT1C4O75897 302 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 CCNB2O95067 398 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 BAG2O95816 211 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 APOA2P02652 100 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 HMGN1P05114 100 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 KRT8P05787 483 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 CTSGP08311 255 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 ZNF688P0C7X2 276 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 FGF9P31371 208 aaPredicted RBP2.43□□□□□ -2.02
HERC1-211ENST00000560983 CEACAM6P40199 344 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 RPL37AP61513 92 aaKnown RBP2.43□□□□□ -2.02
HERC1-211ENST00000560983 PLA2G7Q13093 441 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 ATP6AP1Q15904 470 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 YIF1BQ5BJH7 314 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 GLYATQ6IB77 296 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 CGB2Q6NT52 195 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 MMD2Q8IY49 270 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 C1orf158Q8N1D5 194 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 OR51A2Q8NGJ7 313 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 OR5D14Q8NGL3 314 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 OR2G2Q8NGZ5 317 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 TEX47Q8TBZ9 253 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 VN1R17PQ8TDU5 208 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 DCANP1Q8TF63 244 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 IL1F10Q8WWZ1 152 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 BSCL2Q96G97 398 aaPredicted RBP2.43□□□□□ -2.02
HERC1-211ENST00000560983 C5orf30Q96GV9 206 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 SPACA1Q9HBV2 294 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 GID8Q9NWU2 228 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 CLN6Q9NWW5 311 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 OR1A1Q9P1Q5 309 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 ABCD2Q9UBJ2 740 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 AP3M1Q9Y2T2 418 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 PEX16Q9Y5Y5 336 aa2.43□□□□□ -2.02
HERC1-211ENST00000560983 TRAV26-1A0A087WT03 109 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 TRAV3A0A0B4J244 114 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3-66A0A0C4DH42 116 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 PLAC8L1A1L4L8 177 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 FAM90A26D6RGX4 464 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 ZNF670-ZNF695F2Z2N8 137 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 H3BN98 237 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 PANO1I0J062 215 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 RGS16O15492 202 aaPredicted RBP2.42□□□□□ -2.02
HERC1-211ENST00000560983 CIDEAO60543 219 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 NAPSAO96009 420 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 IGLV2-8P01709 118 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 FABP3P05413 133 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 CD5P06127 495 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 GLAP06280 429 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 SAA1P0DJI8 122 aaPredicted RBP2.42□□□□□ -2.02
HERC1-211ENST00000560983 DEFB130BP0DP73 79 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 DEFB130AP0DP74 79 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 GTF2F2P13984 249 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 SERPINA2P20848 420 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 FXYD7P58549 80 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 NUTF2P61970 127 aaKnown RBP2.42□□□□□ -2.02
HERC1-211ENST00000560983 SNRPGP62308 76 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms