RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 IFNA17P01571 189 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 HSPB1P04792 205 aaKnown RBP9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 MFAP2P55001 183 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 RAB25P57735 213 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 DHRS2Q13268 280 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 C15orf32Q32M92 178 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 OR2C3Q8N628 320 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
RABGGTA-218ENST00000560777 IGHV4OR15-8A0A075B7B6 117 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 A0A087WW49 117 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 ANKRD34BA5PLL1 514 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 HLA-AP01891 365 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 SULT1A3P0DMM9 295 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 SULT1A4P0DMN0 295 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 HIST1H1BP16401 226 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 CD33P20138 364 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 MECP2P51608 486 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 ZNF616Q08AN1 781 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 C4orf46Q504U0 113 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 PDLIM3Q53GG5 364 aaPredicted RBP9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 LYG2Q86SG7 212 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 DPF1Q92782 380 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 PDCD10Q9BUL8 212 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 PLEKHA3Q9HB20 300 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 NUDT15Q9NV35 164 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 NBEAL1Q6ZS30 2694 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 NOTCH3Q9UM47 2321 aa9.21□□□□□ -0.94
RABGGTA-218ENST00000560777 A0A1B0GU03 582 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 LINC01619G3V211 115 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 DUS4LO95620 317 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 TRBV12-3P01733 135 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 SPCS3P61009 180 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 SMCO1Q147U7 214 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 SLC25A24Q6NUK1 477 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 DUSP18Q8NEJ0 188 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 OR1P1Q8NH06 330 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 RANGRFQ9HD47 186 aaPredicted RBP9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 PEF1Q9UBV8 284 aaKnown RBP9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 TMED3Q9Y3Q3 217 aa9.2□□□□□ -0.94
RABGGTA-218ENST00000560777 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 PITX3O75364 302 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 IGHV3-23P01764 117 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 HOXB5P09067 269 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 IGLL1P15814 213 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 SLURP1P55000 103 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 EXOSC2Q13868 293 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 GGNBP1Q5YKI7 109 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 NRARPQ7Z6K4 114 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 ZNF114Q8NC26 417 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 OR1L6Q8NGR2 347 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 COQ8AQ8NI60 647 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 DCUN1D4Q92564 292 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 DLX4Q92988 240 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 THYN1Q9P016 225 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 S4R3C0 116 aa9.19□□□□□ -0.94
RABGGTA-218ENST00000560777 MFSD2BA6NFX1 497 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 G3V4G9 280 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 CYB5BO43169 146 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 ADAP1O75689 374 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 NXPH3O95157 252 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 SLC25A6P12236 298 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 SNCAP37840 140 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 PVRIGQ6DKI7 326 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 VN1R17PQ8TDU5 208 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 MITD1Q8WV92 249 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 RCC1LQ96I51 464 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 CXorf58Q96LI9 332 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 SEC22CQ9BRL7 303 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 CACFD1Q9UGQ2 172 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 FBN3Q75N90 2809 aa9.18□□□□□ -0.94
RABGGTA-218ENST00000560777 TRBV7-1A0A0A6YYK4 115 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 MPTX1A8MV57 137 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 K7EIM0 57 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 BMPR1BO00238 502 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 CLEC3BP05452 202 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 RNASE2P10153 161 aaKnown RBP9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 ZP3P21754 424 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 HOXA1P49639 335 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 DEFA1P59665 94 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 DEFA3P59666 94 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 TNFRSF9Q07011 255 aa9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
RABGGTA-218ENST00000560777 BSXQ3C1V8 233 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms