RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CCDC12Q8WUD4 166 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 DNAJB3Q8WWF6 145 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ANKRD7Q92527 254 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ZNF75CPQ92670 426 aaPredicted RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 C12orf43Q96C57 262 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 MS4A6EQ96DS6 147 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SMIM12Q96EX1 92 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 MSANTD3Q96H12 275 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ANKRD36BP1Q96IX9 119 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 AMELYQ99218 206 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 NABP2Q9BQ15 211 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SLC50A1Q9BRV3 221 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM70Q9BUB7 260 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TIPINQ9BVW5 301 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 UPF3BQ9BZI7 483 aaKnown RBP-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 YIPF3Q9GZM5 350 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 METTL9Q9H1A3 318 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 WDR54Q9H977 334 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TREM1Q9NP99 234 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 GPR84Q9NQS5 396 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 C1orf109Q9NX04 203 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 CMTM6Q9NX76 183 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 IL36BQ9NZH7 164 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 FUT9Q9Y231 359 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SNURFQ9Y675 71 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 PXMP4Q9Y6I8 212 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 SPAG17Q6Q759 2223 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TNXBP22105 4242 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 ABCA2Q9BZC7 2435 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 MYCBP2O75592 4640 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 STAB1Q9NY15 2570 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 TENM4Q6N022 2769 aa-0.12□□□□□ -2.43
FOXN3-216ENST00000557496 NUP160Q12769 1436 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 MYO7AQ13402 2215 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 NCOR1O75376 2440 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TANC2Q9HCD6 1990 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 MGAMO43451 1857 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 NUP210LQ5VU65 1888 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TRPM7Q96QT4 1865 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 LRPPRCP42704 1394 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TRAV9-1A0A075B6T8 112 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 A0A0J9YY10 115 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TEX50A0A1B0GTY4 177 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 A0A1B0GX78 115 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C5orf49A4QMS7 147 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TRPC5OSA6NMA1 111 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 OR4C45A6NMZ5 311 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 H0YC42 278 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 BUB1B-PAK6H3BSN5 160 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 K7EIL1 84 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CCRL2O00421 344 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 LIN7AO14910 233 aaPredicted RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 ACOX3O15254 700 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 OR1I1O60431 355 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 NOS1APO75052 506 aaPredicted RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 YEATS4O95619 227 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 PRM2P04554 102 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TYMSP04818 313 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 MSMBP08118 114 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 SRP19P09132 144 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CCDC172P0C7W6 258 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FGF6P10767 208 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 IL9P15248 144 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CFL1P23528 166 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 PSMB6P28072 239 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 BRS3P32247 399 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CD79BP40259 229 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FXYD2P54710 66 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 EMP1P54849 157 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 RPS20P60866 119 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 HIST1H4AP62805 103 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 BTN3A2P78410 334 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CCL20P78556 96 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 RPL18Q07020 188 aaKnown RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 RSU1Q15404 277 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 SYCP1Q15431 976 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 ASB16-AS1Q495Z4 193 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 DNAL1Q4LDG9 190 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FBXO48Q5FWF7 155 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C1orf137Q5JT78 98 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C9orf64Q5T6V5 341 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 GDF5OSQ5U4N7 250 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 AADACL3Q5VUY0 350 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 AADACL4Q5VUY2 407 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 KRTAP26-1Q6PEX3 210 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 COMMD7Q86VX2 200 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 BPIFA4PQ86YQ2 179 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CLVS1Q8IUQ0 354 aaPredicted RBP-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 FUNDC1Q8IVP5 155 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 CD302Q8IX05 232 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 Q8IYB0 196 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C1orf158Q8N1D5 194 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TBC1D19Q8N5T2 526 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TMEM156Q8N614 296 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C3orf56Q8N813 242 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 C12orf29Q8N999 325 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 WFDC11Q8NEX6 87 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 OR5AK3PQ8NH89 298 aa-0.13□□□□□ -2.43
FOXN3-216ENST00000557496 TERB2Q8NHR7 220 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms