RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 SPATA45Q537H7 98 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 Q6ZN92 141 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 OR2T6Q8NHC8 308 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 CDX2Q99626 313 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 ZNF355PQ9NSJ1 428 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 TLN1Q9Y490 2541 aaKnown RBP14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 IGKV1OR2-108A0A075B7D4 117 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 SSBP2P81877 361 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 FOXL1Q12952 345 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 OR4A47Q6IF82 309 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 NRN1Q9NPD7 142 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 A8MXE2 369 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 EIF4EBP1Q13541 118 aaPredicted RBP14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 Q56UQ5 140 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 C10orf55Q5SWW7 151 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 SLC24A4Q8NFF2 622 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 NPVFQ9HCQ7 196 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 IL36BQ9NZH7 164 aa14.03□□□□□ -0.16
PPP4R3A-208ENST00000555462 TMEM210A6NLX4 147 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 GABRA6Q16445 453 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 C9orf106Q8NAJ2 232 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 STARD4Q96DR4 205 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 OR2V2Q96R30 315 aa14.02□□□□□ -0.16
PPP4R3A-208ENST00000555462 SAA2-SAA4A0A096LPE2 208 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 C15orf65H3BRN8 121 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 SIAH2O43255 324 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 SAA2P0DJI9 122 aaPredicted RBP14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 BRS3P32247 399 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 BLNKQ8WV28 456 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 NABP2Q9BQ15 211 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 CXXC4Q9H2H0 198 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 KLF13Q9Y2Y9 288 aaPredicted RBP14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 IQCF6A8MYZ5 107 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 M0R1B8 84 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 DLEU1O43261 78 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 TMEM183BQ1AE95 376 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 STPG4Q8N801 248 aa14.02□□□□□ -0.17
PPP4R3A-208ENST00000555462 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 FOXA3P55318 350 aaPredicted RBP14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 RHOBP62745 196 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 GNG5P63218 68 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 CT45A1Q5HYN5 189 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 RPRMLQ8N4K4 120 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 CT45A3Q8NHU0 189 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 CCL13Q99616 98 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 KIR2DL5BA0A0G2JN68 375 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 KIR2DL5BA0A0G2JPC4 375 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 OPRK1P41145 380 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 ZNF718Q3SXZ3 478 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 MALRD1Q5VYJ5 2156 aa14.01□□□□□ -0.17
PPP4R3A-208ENST00000555462 WT1P19544 449 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 C1orf210Q8IVY1 113 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 FAM216BQ8N7L0 139 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 ATRXP46100 2492 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 SRRM4A7MD48 611 aaKnown RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 GGTLC3B5MD39 225 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 TMPRSS2O15393 492 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 CYC1P08574 325 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 ACSF3Q4G176 576 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 LBHQ53QV2 105 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 UNQ5815/PRO19632Q6UWF5 114 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 KIR3DL3Q8N743 410 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 IFI27L2Q9H2X8 130 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 V9GYV3 84 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 LOC102724200A0A096LPH7 203 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 CORTO00230 105 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 RPL8P62917 257 aaKnown RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 PARD6GQ9BYG4 376 aaPredicted RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 DNAJC4Q9NNZ3 241 aa14□□□□□ -0.17
PPP4R3A-208ENST00000555462 MRPS18CQ9Y3D5 142 aaKnown RBP14□□□□□ -0.17
PPP4R3A-208ENST00000555462 PIGBOS1A0A0B4J2F0 54 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 J3QR06 171 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 RAB7AP51149 207 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 SLAQ13239 276 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 RNASEKQ6P5S7 137 aaKnown RBP13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 FAM214BQ7L5A3 538 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 ZBTB34Q8NCN2 500 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 ITLN1Q8WWA0 313 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 ZC2HC1AQ96GY0 325 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 PMCHL2Q9BQD1 86 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 ZNF586Q9NXT0 402 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 TECRQ9NZ01 308 aaKnown RBP13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 COL6A6A6NMZ7 2263 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 IGHV3-72A0A0B4J1Y9 119 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 A0A1W2PRD5 423 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 A0A1W2PRF3 423 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 A0A1W2PRM7 423 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 TNFSF13O75888 250 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 ZNF137PP52743 207 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 MFAP2P55001 183 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 MRPS11P82912 194 aaKnown RBP13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 TIGITQ495A1 244 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 GCSAMQ8N6F7 178 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 CLEC5AQ9NY25 188 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 SH3BGRL2Q9UJC5 107 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 OR51B2Q9Y5P1 312 aa13.99□□□□□ -0.17
PPP4R3A-208ENST00000555462 CHRNB4P30926 498 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms