RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 MLANAQ16655 118 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 VWA1Q6PCB0 445 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 SIGLECL1Q8N7X8 197 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 S1PR3Q99500 378 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 JPT1Q9UK76 154 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 TBL2Q9Y4P3 447 aaKnown RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 ARL2-SNX15V9GYD0 113 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 PLXNB1O43157 2135 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 TANC2Q9HCD6 1990 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 NAV3Q8IVL0 2385 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 SAA2-SAA4A0A096LPE2 208 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 A0A1W2PS18 150 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 HELTA6NFD8 242 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 C15orf61A6NNL5 157 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 GGTLC3B5MD39 225 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 C21orf140B9A014 251 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CA1P00915 261 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 LINC00614P0C842 121 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 HOXB4P17483 251 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 NPY1RP25929 384 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 KIR2DS2P43631 304 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF83P51522 516 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CX3CL1P78423 397 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 PSG5Q15238 335 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 COX19Q49B96 90 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CT45A1Q5HYN5 189 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 OR10J3Q5JRS4 329 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 FAM201AQ5SY85 155 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 OR4A47Q6IF82 309 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 WDR73Q6P4I2 378 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 DUX4L9Q6RFH8 374 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 SLC24A4Q8NFF2 622 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 OR4B1Q8NGF8 309 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CT45A3Q8NHU0 189 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 FAM168AQ92567 244 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 RBM14Q96PK6 669 aaKnown RBP4.44□□□□□ -1.7
LIMA1-212ENST00000552491 RNF2Q99496 336 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 NRN1Q9NPD7 142 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 DCAF16Q9NXF7 216 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 CLCF1Q9UBD9 225 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 NAT8BQ9UHF3 227 aa4.44□□□□□ -1.7
LIMA1-212ENST00000552491 DIRC3C9JPN6 131 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 BMPR1BO00238 502 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SFTPCP11686 197 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 PMCHP20382 165 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 KIR2DL2P43627 348 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 GNG4P50150 75 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 HSPE1P61604 102 aaKnown RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 RELQ04864 619 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 MMDQ15546 238 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 MRPL54Q6P161 138 aaKnown RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 Q6ZT83 130 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 NIT1Q86X76 327 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 FAM19A2Q8N3H0 131 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 GCSAMQ8N6F7 178 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 CNEP1R1Q8N9A8 125 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 CORO2AQ92828 525 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 NEUROG1Q92886 237 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 NABP2Q9BQ15 211 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 HINT2Q9BX68 163 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TUBG2Q9NRH3 451 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TMEM167BQ9NRX6 74 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TMEM14BQ9NUH8 114 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 ZNF586Q9NXT0 402 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 IDI2-AS1Q9NZ38 188 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 ZNRD1Q9P1U0 126 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SLC25A10Q9UBX3 287 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 IL19Q9UHD0 177 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SLC45A2Q9UMX9 530 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TTC28Q96AY4 2481 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SRRM5B3KS81 715 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 FNDC10F2Z333 226 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 F2RL2O00254 374 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 LAMTOR5O43504 91 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 MMP23AO75900 390 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 NDUFB8O95169 186 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 OR5G3P0C626 314 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SAA2P0DJI9 122 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-212ENST00000552491 CGB3P0DN86 165 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 CGB7P0DN87 165 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 SRIP30626 198 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 AMTP48728 403 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 GUSBP1Q15486 140 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 C17orf58Q2M2W7 97 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 MAJINQ3KP22 176 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 PRR31Q5SQ13 230 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 C1orf174Q8IYL3 243 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 UBALD2Q8IYN6 164 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 STPG4Q8N801 248 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 C9orf106Q8NAJ2 232 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 NHLRC2Q8NBF2 726 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 OR2Z1Q8NG97 314 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 OR4S2Q8NH73 311 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 LINC00479Q96M42 142 aa4.43□□□□□ -1.7
LIMA1-212ENST00000552491 TRIB1Q96RU8 372 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms