RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CACNG5Q9UF02 275 aa17.38■□□□□ 0.37
BRF1-216ENST00000550208 A0A0B4J2A0 478 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 LINC01619G3V211 115 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 IFNA17P01571 189 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 TCRBP04435 133 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 C15orf32Q32M92 178 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 OXLD1Q5BKU9 147 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 SLC25A24Q6NUK1 477 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 SHPKQ9UHJ6 478 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 NBEAL1Q6ZS30 2694 aa17.37■□□□□ 0.37
BRF1-216ENST00000550208 C9orf170A2RU37 121 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 G3V4G9 280 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 TRBV12-3P01733 135 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 OR8U8P0C7N1 319 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 SLURP1P55000 103 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 MFAP2P55001 183 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 ASAH1Q13510 395 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 EXOSC2Q13868 293 aaKnown RBP17.36■□□□□ 0.37
BRF1-216ENST00000550208 C1QL4Q86Z23 238 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 OR2C3Q8N628 320 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 LRTM2Q8N967 370 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 PLEKHA3Q9HB20 300 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 RANGRFQ9HD47 186 aaPredicted RBP17.36■□□□□ 0.37
BRF1-216ENST00000550208 PEF1Q9UBV8 284 aaKnown RBP17.36■□□□□ 0.37
BRF1-216ENST00000550208 S4R3C0 116 aa17.36■□□□□ 0.37
BRF1-216ENST00000550208 NOTCH3Q9UM47 2321 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 IGHV3-23P01764 117 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 OR4E1P0C645 316 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 NMSQ5H8A3 153 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 MZT2BQ6NZ67 158 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 DCUN1D4Q92564 292 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 PDCD10Q9BUL8 212 aa17.35■□□□□ 0.37
BRF1-216ENST00000550208 F11RQ9Y624 299 aaKnown RBP17.35■□□□□ 0.37
BRF1-216ENST00000550208 TRAV6A0A075B6T7 132 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 SULT1A3P0DMM9 295 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 SULT1A4P0DMN0 295 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 ERHP84090 104 aaKnown RBP17.34■□□□□ 0.37
BRF1-216ENST00000550208 AARDQ4LEZ3 155 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 SAMD5Q5TGI4 173 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 DLX4Q92988 240 aaPredicted RBP17.34■□□□□ 0.37
BRF1-216ENST00000550208 RCC1LQ96I51 464 aaKnown RBP17.34■□□□□ 0.37
BRF1-216ENST00000550208 C20orf85Q9H1P6 137 aa17.34■□□□□ 0.37
BRF1-216ENST00000550208 FBN3Q75N90 2809 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.33■□□□□ 0.36
BRF1-216ENST00000550208 FAM240BA0A1B0GVZ2 78 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 SPCS3P61009 180 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 DHRS2Q13268 280 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 LYG2Q86SG7 212 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 OR52E5Q8NH55 327 aa17.33■□□□□ 0.36
BRF1-216ENST00000550208 DUXBA0A1W2PPF3 345 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 MFSD2BA6NFX1 497 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 NXPH3O95157 252 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 HLA-AP01891 365 aaKnown RBP17.32■□□□□ 0.36
BRF1-216ENST00000550208 SMCO1Q147U7 214 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 C4orf46Q504U0 113 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 THYN1Q9P016 225 aa17.32■□□□□ 0.36
BRF1-216ENST00000550208 PIGBOS1A0A0B4J2F0 54 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 INS-IGF2F8WCM5 200 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 CYB5BO43169 146 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 HOXB5P09067 269 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 HOXD3P31249 432 aaPredicted RBP17.31■□□□□ 0.36
BRF1-216ENST00000550208 HOXA1P49639 335 aaPredicted RBP17.31■□□□□ 0.36
BRF1-216ENST00000550208 OR52B4Q8NGK2 314 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 OR1L6Q8NGR2 347 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 OR1P1Q8NH06 330 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 EEF1AKMT3Q96AZ1 226 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 ENY2Q9NPA8 101 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 NUDT15Q9NV35 164 aa17.31■□□□□ 0.36
BRF1-216ENST00000550208 IGHV3-21A0A0B4J1V1 117 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 A0A1B0GU03 582 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 OVOL1O14753 267 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 H2AFB2P0C5Z0 115 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 PDLIM3Q53GG5 364 aaPredicted RBP17.3■□□□□ 0.36
BRF1-216ENST00000550208 CLEC19AQ6UXS0 136 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 ZNF114Q8NC26 417 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 CXorf58Q96LI9 332 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 CCDC140Q96MF4 163 aa17.3■□□□□ 0.36
BRF1-216ENST00000550208 MCRIP2Q9BUT9 160 aaKnown RBP17.3■□□□□ 0.36
BRF1-216ENST00000550208 PPP5D1E7EU14 171 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 BMPR1BO00238 502 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 DUS4LO95620 317 aaKnown RBP17.29■□□□□ 0.36
BRF1-216ENST00000550208 ZP3P21754 424 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 SNCAP37840 140 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 GGNBP1Q5YKI7 109 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 COQ8AQ8NI60 647 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 TMED3Q9Y3Q3 217 aa17.29■□□□□ 0.36
BRF1-216ENST00000550208 CEBPZOSA8MTT3 80 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 PITX3O75364 302 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 ADAP1O75689 374 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 CLEC3BP05452 202 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 KLF5Q13887 457 aaPredicted RBP17.28■□□□□ 0.36
BRF1-216ENST00000550208 BEAN1Q3B7T3 259 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 OR1S1Q8NH92 325 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 ZNF502Q8TBZ5 544 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 VN1R17PQ8TDU5 208 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 MISP3Q96FF7 219 aa17.28■□□□□ 0.36
BRF1-216ENST00000550208 TRBV7-1A0A0A6YYK4 115 aa17.27■□□□□ 0.36
BRF1-216ENST00000550208 SEC14L6B5MCN3 397 aa17.27■□□□□ 0.36
BRF1-216ENST00000550208 K7EIM0 57 aa17.27■□□□□ 0.36
BRF1-216ENST00000550208 RNASE2P10153 161 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms