RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SFT2D2O95562 160 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 DUS4LO95620 317 aaKnown RBP14.93□□□□□ -0.02
DDX54-207ENST00000550016 IFNA17P01571 189 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 IGLL1P15814 213 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 PPP1R1AQ13522 171 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 EXOSC2Q13868 293 aaKnown RBP14.93□□□□□ -0.02
DDX54-207ENST00000550016 C15orf32Q32M92 178 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 PDCD10Q9BUL8 212 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 PEF1Q9UBV8 284 aaKnown RBP14.93□□□□□ -0.02
DDX54-207ENST00000550016 SHPKQ9UHJ6 478 aa14.93□□□□□ -0.02
DDX54-207ENST00000550016 G3V4G9 280 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 UPK1BO75841 260 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 AARDQ4LEZ3 155 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 OXLD1Q5BKU9 147 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 SAMD5Q5TGI4 173 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 LYZL2Q7Z4W2 148 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 LRTM2Q8N967 370 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 MCRIP2Q9BUT9 160 aaKnown RBP14.92□□□□□ -0.02
DDX54-207ENST00000550016 PLEKHA3Q9HB20 300 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 THYN1Q9P016 225 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 CACNG5Q9UF02 275 aa14.92□□□□□ -0.02
DDX54-207ENST00000550016 F11RQ9Y624 299 aaKnown RBP14.92□□□□□ -0.02
DDX54-207ENST00000550016 DUXBA0A1W2PPF3 345 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 SLURP1P55000 103 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 ERHP84090 104 aaKnown RBP14.91□□□□□ -0.02
DDX54-207ENST00000550016 ANKRD55Q3KP44 614 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 FAM209BQ5JX69 171 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 SLC25A24Q6NUK1 477 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 MZT2BQ6NZ67 158 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 OR2C3Q8N628 320 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 OR1L6Q8NGR2 347 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 DCUN1D4Q92564 292 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 DMRT1Q9Y5R6 373 aa14.91□□□□□ -0.02
DDX54-207ENST00000550016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.9□□□□□ -0.02
DDX54-207ENST00000550016 C9orf170A2RU37 121 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 INS-IGF2F8WCM5 200 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 TCRBP04435 133 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 SULT1A3P0DMM9 295 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 SULT1A4P0DMN0 295 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 ZP3P21754 424 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 SPCS3P61009 180 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 ASAH1Q13510 395 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 SPINK9Q5DT21 86 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 NMSQ5H8A3 153 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 C1QL4Q86Z23 238 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 OR52E5Q8NH55 327 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 EEF1AKMT3Q96AZ1 226 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 CXorf58Q96LI9 332 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 GPR61Q9BZJ8 451 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 TBC1D24Q9ULP9 559 aa14.9□□□□□ -0.02
DDX54-207ENST00000550016 TRBV12-3P01733 135 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 OR4E1P0C645 316 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 ANXA7P20073 488 aaKnown RBP14.89□□□□□ -0.03
DDX54-207ENST00000550016 HOXD3P31249 432 aaPredicted RBP14.89□□□□□ -0.03
DDX54-207ENST00000550016 MFAP2P55001 183 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 OR1P1Q8NH06 330 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 DLX4Q92988 240 aaPredicted RBP14.89□□□□□ -0.03
DDX54-207ENST00000550016 C20orf85Q9H1P6 137 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 ENY2Q9NPA8 101 aa14.89□□□□□ -0.03
DDX54-207ENST00000550016 TRBV7-1A0A0A6YYK4 115 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 A0A1B0GU03 582 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 OVOL1O14753 267 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 HLA-AP01891 365 aaKnown RBP14.88□□□□□ -0.03
DDX54-207ENST00000550016 BEAN1Q3B7T3 259 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 PDLIM3Q53GG5 364 aaPredicted RBP14.88□□□□□ -0.03
DDX54-207ENST00000550016 LYG2Q86SG7 212 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 ZNF114Q8NC26 417 aa14.88□□□□□ -0.03
DDX54-207ENST00000550016 FAM240BA0A1B0GVZ2 78 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 SNCAP37840 140 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 HOXA1P49639 335 aaPredicted RBP14.87□□□□□ -0.03
DDX54-207ENST00000550016 IFITM3Q01628 133 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 DHRS2Q13268 280 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 C4orf46Q504U0 113 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 KPRPQ5T749 579 aaPredicted RBP14.87□□□□□ -0.03
DDX54-207ENST00000550016 VN1R17PQ8TDU5 208 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 TMED3Q9Y3Q3 217 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 S4R3C0 116 aa14.87□□□□□ -0.03
DDX54-207ENST00000550016 MFSD2BA6NFX1 497 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 SEC14L6B5MCN3 397 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 BMPR1BO00238 502 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 IGHV3-23P01764 117 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 KLF5Q13887 457 aaPredicted RBP14.86□□□□□ -0.03
DDX54-207ENST00000550016 C9orf66Q5T8R8 295 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 CLEC19AQ6UXS0 136 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 COQ8AQ8NI60 647 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 CCDC140Q96MF4 163 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 NUDT15Q9NV35 164 aa14.86□□□□□ -0.03
DDX54-207ENST00000550016 TRAV6A0A075B6T7 132 aa14.85□□□□□ -0.03
DDX54-207ENST00000550016 SLC25A6P12236 298 aa14.85□□□□□ -0.03
DDX54-207ENST00000550016 SUB1P53999 127 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX54-207ENST00000550016 RPEL1Q2QD12 228 aa14.85□□□□□ -0.03
DDX54-207ENST00000550016 ZNF502Q8TBZ5 544 aa14.85□□□□□ -0.03
DDX54-207ENST00000550016 MISP3Q96FF7 219 aa14.85□□□□□ -0.03
DDX54-207ENST00000550016 CEBPZOSA8MTT3 80 aa14.84□□□□□ -0.03
DDX54-207ENST00000550016 PPP5D1E7EU14 171 aa14.84□□□□□ -0.03
DDX54-207ENST00000550016 WIPF1O43516 503 aa14.84□□□□□ -0.03
DDX54-207ENST00000550016 GGCTO75223 188 aaKnown RBP14.84□□□□□ -0.03
DDX54-207ENST00000550016 HOXB5P09067 269 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms