RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 THYN1Q9P016 225 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 PEF1Q9UBV8 284 aaKnown RBP14.17□□□□□ -0.14
COPS7A-216ENST00000543170 FBXL7Q9UJT9 491 aa14.17□□□□□ -0.14
COPS7A-216ENST00000543170 F11RQ9Y624 299 aaKnown RBP14.17□□□□□ -0.14
COPS7A-216ENST00000543170 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
COPS7A-216ENST00000543170 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 DUXBA0A1W2PPF3 345 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 LYRM1O43325 122 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 LGI3Q8N145 548 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 SLC35G3Q8N808 338 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 LRTM2Q8N967 370 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 ZNF114Q8NC26 417 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 PDCD10Q9BUL8 212 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 PLEKHA3Q9HB20 300 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 CACFD1Q9UGQ2 172 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
COPS7A-216ENST00000543170 LINC00854A0A1B0GVQ3 168 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 PLA2G10O15496 165 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 ST8SIA3O43173 380 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 MECP2P51608 486 aaKnown RBP14.15□□□□□ -0.14
COPS7A-216ENST00000543170 SLURP1P55000 103 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 ZNF846Q147U1 533 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 PDLIM3Q53GG5 364 aaPredicted RBP14.15□□□□□ -0.14
COPS7A-216ENST00000543170 C1QL4Q86Z23 238 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 OR2C3Q8N628 320 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 OR52E5Q8NH55 327 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 CXorf58Q96LI9 332 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
COPS7A-216ENST00000543170 MEGF8Q7Z7M0 2845 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 OVOL1O14753 267 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 NDUFB8O95169 186 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 SFT2D2O95562 160 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 VAMP1P23763 118 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 HOXD3P31249 432 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-216ENST00000543170 PPP1R1AQ13522 171 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 NMSQ5H8A3 153 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 C9orf66Q5T8R8 295 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 Q6ZRM9 215 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 OR1P1Q8NH06 330 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 DCUN1D4Q92564 292 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 DLX4Q92988 240 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-216ENST00000543170 EEF1AKMT3Q96AZ1 226 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 GPR146Q96CH1 333 aa14.14□□□□□ -0.15
COPS7A-216ENST00000543170 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
COPS7A-216ENST00000543170 TRBV7-1A0A0A6YYK4 115 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 ANKRD34BA5PLL1 514 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 IFNA17P01571 189 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 TRBV12-3P01733 135 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 ERHP84090 104 aaKnown RBP14.13□□□□□ -0.15
COPS7A-216ENST00000543170 EGFEM1PQ0D2K5 195 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 VN1R17PQ8TDU5 208 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 CCDC140Q96MF4 163 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 PRR13Q9NZ81 148 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 CACNG5Q9UF02 275 aa14.13□□□□□ -0.15
COPS7A-216ENST00000543170 INSL3P51460 131 aa14.12□□□□□ -0.15
COPS7A-216ENST00000543170 SPCS3P61009 180 aa14.12□□□□□ -0.15
COPS7A-216ENST00000543170 ATP6V0BQ99437 205 aa14.12□□□□□ -0.15
COPS7A-216ENST00000543170 MFSD2BA6NFX1 497 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 SEC14L6B5MCN3 397 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 BMPR1BO00238 502 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 SULT1A3P0DMM9 295 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 SULT1A4P0DMN0 295 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 MFAP2P55001 183 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 KLF5Q13887 457 aaPredicted RBP14.11□□□□□ -0.15
COPS7A-216ENST00000543170 RPEL1Q2QD12 228 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 ANKRD55Q3KP44 614 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 SLC25A24Q6NUK1 477 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 LYZL2Q7Z4W2 148 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 FLVCR2Q9UPI3 526 aa14.11□□□□□ -0.15
COPS7A-216ENST00000543170 UPK1BO75841 260 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 HLA-AP01891 365 aaKnown RBP14.1□□□□□ -0.15
COPS7A-216ENST00000543170 SLC25A6P12236 298 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 HOXA1P49639 335 aaPredicted RBP14.1□□□□□ -0.15
COPS7A-216ENST00000543170 DEFA6Q01524 100 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 ASAH1Q13510 395 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 SMCO1Q147U7 214 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 ACSM6Q6P461 480 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 ZNF502Q8TBZ5 544 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 C20orf85Q9H1P6 137 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 ENY2Q9NPA8 101 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 ZMAT5Q9UDW3 170 aaKnown RBP14.1□□□□□ -0.15
COPS7A-216ENST00000543170 TBC1D24Q9ULP9 559 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 TMED3Q9Y3Q3 217 aa14.1□□□□□ -0.15
COPS7A-216ENST00000543170 A0A1B0GU03 582 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 C9orf170A2RU37 121 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 OR4E1P0C645 316 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 SPINK9Q5DT21 86 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 PVRIGQ6DKI7 326 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 REC114Q7Z4M0 266 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 LYG2Q86SG7 212 aa14.09□□□□□ -0.15
COPS7A-216ENST00000543170 K7EIM0 57 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 GGCTO75223 188 aaKnown RBP14.08□□□□□ -0.16
COPS7A-216ENST00000543170 TCRBP04435 133 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 ARL3P36405 182 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 SNCAP37840 140 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 DHRS2Q13268 280 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 TATDN3Q17R31 274 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 BSXQ3C1V8 233 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 MZT2BQ6NZ67 158 aa14.08□□□□□ -0.16
COPS7A-216ENST00000543170 CLEC19AQ6UXS0 136 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms