RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 F2RL2O00254 374 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 GFRA3O60609 400 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 CGB3P0DN86 165 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 CGB7P0DN87 165 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 SPATA31B1PQ5VZV4 182 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 FAM57AQ8TBR7 257 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
DDX55-209ENST00000542286 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
DDX55-209ENST00000542286 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 GRIFINA4D1Z8 144 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
DDX55-209ENST00000542286 RAB7AP51149 207 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 BSPH1Q075Z2 132 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 MLANAQ16655 118 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 STUMQ69YW2 141 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 PPP1R35Q8TAP8 253 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 HRNRQ86YZ3 2850 aaPredicted RBP12.1□□□□□ -0.47
DDX55-209ENST00000542286 CEACAM8P31997 349 aaPredicted RBP12.1□□□□□ -0.47
DDX55-209ENST00000542286 TIMP3P35625 211 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 VDAC2P45880 294 aaPredicted RBP12.1□□□□□ -0.47
DDX55-209ENST00000542286 ERVK-16P61578 105 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 DIAPH2-AS1Q14236 149 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 MGST2Q99735 147 aa12.1□□□□□ -0.47
DDX55-209ENST00000542286 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
DDX55-209ENST00000542286 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 FOXC1Q12948 553 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 Q8NA96 180 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 VN1R17PQ8TDU5 208 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 DDB2Q92466 427 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 CCL17Q92583 94 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
DDX55-209ENST00000542286 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 TRGV10A0A0A0MS01 117 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 VENTXO95231 258 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 THBDP07204 575 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 GATA2P23769 480 aaPredicted RBP12.09□□□□□ -0.47
DDX55-209ENST00000542286 CDKN1AP38936 164 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 RANP62826 216 aaKnown RBP12.09□□□□□ -0.47
DDX55-209ENST00000542286 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
DDX55-209ENST00000542286 CHRNB4P30926 498 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 ADMP35318 185 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 CFHR2P36980 270 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 FAM169BQ8N8A8 192 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
DDX55-209ENST00000542286 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
DDX55-209ENST00000542286 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 TPPP2P59282 170 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 ADIPOQQ15848 244 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 ATP6V1FQ16864 119 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
DDX55-209ENST00000542286 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 PPIAL4AQ9Y536 164 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 TIMM9Q9Y5J7 89 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
DDX55-209ENST00000542286 ARHGAP32A7KAX9 2087 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 C11orf94C9JXX5 98 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 SELENOVP59797 346 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 COTL1Q14019 142 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 ZNF114Q8NC26 417 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 RNASE8Q8TDE3 154 aaKnown RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 FOXH1O75593 365 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 ACTL6BO94805 426 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 ASCL5Q7RTU5 278 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 LINC01551Q86U37 167 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 OR10W1Q8NGF6 305 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 SLC35E1Q96K37 410 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 PARD6GQ9BYG4 376 aaPredicted RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 SEPSECSQ9HD40 501 aaKnown RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 IDI2-AS1Q9NZ38 188 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 IL19Q9UHD0 177 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 TP53TG3Q9ULZ0 132 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 CA2P00918 260 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 ARL14EPLP0DKL9 152 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 MMDQ15546 238 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 CR1LQ2VPA4 569 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 GFRALQ6UXV0 394 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 ZNF788Q6ZQV5 615 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 SGMS2Q8NHU3 365 aa12.07□□□□□ -0.48
DDX55-209ENST00000542286 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
DDX55-209ENST00000542286 PRSS46E5RG02 174 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 C16orf97H3BN30 126 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 FAM87AP0C7U9 286 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 CT45A6P0DMU7 189 aa12.06□□□□□ -0.48
DDX55-209ENST00000542286 CT45A5P0DMU8 189 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms