RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
CCDC7-208ENST00000537047 RPS12P25398 132 aaKnown RBP0.57□□□□□ -2.32
CCDC7-208ENST00000537047 RAB5BP61020 215 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 SUPT4H1P63272 117 aaKnown RBP0.57□□□□□ -2.32
CCDC7-208ENST00000537047 RUNX1Q01196 453 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 GRK1Q15835 563 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 TEX36Q5VZQ5 186 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 MCFD2Q8NI22 146 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 RASSF5Q8WWW0 418 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 AQP3Q92482 292 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 NKIRAS1Q9NYS0 192 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 ATP6V1DQ9Y5K8 247 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 PIK3R4Q99570 1358 aa0.57□□□□□ -2.32
CCDC7-208ENST00000537047 C9orf84Q5VXU9 1444 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 A0A0J9YY10 115 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 A0A1B0GX78 115 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 CETN3O15182 167 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 DCTN3O75935 186 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 OR5F1O95221 314 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 HTR1AP08908 422 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 AP2S1P53680 142 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 UBE2IP63279 158 aaKnown RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 TPM4P67936 248 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 GUK1Q16774 197 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 RPL22L1Q6P5R6 122 aaKnown RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 CD200R1LQ6Q8B3 271 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 LCN15Q6UWW0 184 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 DEFB128Q7Z7B8 93 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 OR4D11Q8NGI4 311 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 OR4C6Q8NH72 309 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 OPTNQ96CV9 577 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 CKLFQ9UBR5 152 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 LSM5Q9Y4Y9 91 aaKnown RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 NCOA6Q14686 2063 aaPredicted RBP0.56□□□□□ -2.32
CCDC7-208ENST00000537047 TTC21AQ8NDW8 1320 aa0.56□□□□□ -2.32
CCDC7-208ENST00000537047 A0A087WX48 190 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 CLPSP04118 112 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 OR5G3P0C626 314 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BOP23527 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BBP33778 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BDP58876 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BCP62807 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 PMAIP1Q13794 54 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST2H2BEQ16778 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.55□□□□□ -2.32
CCDC7-208ENST00000537047 AADACL3Q5VUY0 350 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 SFXN4Q6P4A7 337 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 ZNF826PQ6ZT77 177 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 IQCF2Q8IXL9 164 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 C10orf67Q8IYJ2 551 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BHQ93079 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BNQ99877 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 HIST1H2BMQ99879 126 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 DERL1Q9BUN8 251 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 WDR61Q9GZS3 305 aaKnown RBP0.55□□□□□ -2.32
CCDC7-208ENST00000537047 CISHQ9NSE2 258 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 EVC2Q86UK5 1308 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 MED12LQ86YW9 2145 aa0.55□□□□□ -2.32
CCDC7-208ENST00000537047 INMT-MINDY4F8WBC2 141 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 GOLGA6L19H0YKK7 550 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 TCL1AP56279 114 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 MAGOHP61326 146 aaKnown RBP0.54□□□□□ -2.32
CCDC7-208ENST00000537047 KISS1Q15726 138 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 HIST3H3Q16695 136 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 SPANXN3Q5MJ09 141 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 Q6ZS49 121 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 PHF13Q86YI8 300 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-208ENST00000537047 LRRC25Q8N386 305 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-208ENST00000537047 OR2T4Q8NH00 348 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 LINC00526Q96FQ7 95 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 SCGB3A1Q96QR1 104 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 OR51I1Q9H343 314 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 XPNPEP1Q9NQW7 623 aa0.54□□□□□ -2.32
CCDC7-208ENST00000537047 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 MAST2Q6P0Q8 1798 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 A0A0D9SG52 128 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 BRS3P32247 399 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 SPANXN5Q5MJ07 72 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 HIST2H3PS2Q5TEC6 136 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 LPCAT4Q643R3 524 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 DPPA3Q6W0C5 159 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 Q6ZQT0 140 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 OR13C4Q8NGS5 318 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 PFN4Q8NHR9 129 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 MRPL30Q8TCC3 161 aaKnown RBP0.53□□□□□ -2.32
CCDC7-208ENST00000537047 OR52E6Q96RD3 313 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 LLPHQ9BRT6 129 aaKnown RBP0.53□□□□□ -2.32
CCDC7-208ENST00000537047 GINS4Q9BRT9 223 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 MRPS26Q9BYN8 205 aaKnown RBP0.53□□□□□ -2.32
CCDC7-208ENST00000537047 MIXL1Q9H2W2 232 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 MAP3K5Q99683 1374 aa0.53□□□□□ -2.32
CCDC7-208ENST00000537047 LAMB4A4D0S4 1761 aa0.52□□□□□ -2.33
CCDC7-208ENST00000537047 STRCQ7RTU9 1775 aa0.52□□□□□ -2.33
CCDC7-208ENST00000537047 RALGAPA2Q2PPJ7 1873 aa0.52□□□□□ -2.33
CCDC7-208ENST00000537047 TRBV6-7A0A0A0MS04 114 aa0.52□□□□□ -2.33
CCDC7-208ENST00000537047 EEF1E1-BLOC1S5C9J1V9 151 aa0.52□□□□□ -2.33
CCDC7-208ENST00000537047 KCNK1O00180 336 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms