RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 H3F3AP84243 136 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 STX5Q13190 355 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 AKIRIN2Q53H80 203 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 BORCS7Q96B45 105 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 CHMP6Q96FZ7 201 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 ROBO3Q96MS0 1386 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 ADGRL3Q9HAR2 1447 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 IDI2-AS1Q9NZ38 188 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 GLTPQ9NZD2 209 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 HECW2Q9P2P5 1572 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 FBXO5Q9UKT4 447 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 PRELID3BQ9Y3B1 194 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 AMMECR1Q9Y4X0 333 aaPredicted RBP1.53□□□□□ -2.16
PRKDC-205ENST00000535375 TMEM56-RWDD3S4R434 201 aa1.53□□□□□ -2.16
PRKDC-205ENST00000535375 MALRD1Q5VYJ5 2156 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 NEO1Q92859 1461 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 GGT3PA6NGU5 568 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BOP23527 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BBP33778 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BDP58876 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 TMEM258P61165 79 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BCP62807 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 KISS1Q15726 138 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST2H2BEQ16778 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.52□□□□□ -2.17
PRKDC-205ENST00000535375 C9orf64Q5T6V5 341 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 FAM27BQ5VT28 67 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 AADACL3Q5VUY0 350 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 TMEM42Q69YG0 159 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 RPL22L1Q6P5R6 122 aaKnown RBP1.52□□□□□ -2.17
PRKDC-205ENST00000535375 KTN1-AS1Q86SY8 53 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 LRRC28Q86X40 367 aaPredicted RBP1.52□□□□□ -2.17
PRKDC-205ENST00000535375 ANKRD29Q8N6D5 301 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 ZNF676Q8N7Q3 588 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 C9orf163Q8N9P6 203 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BHQ93079 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 TOMM6Q96B49 74 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BNQ99877 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 HIST1H2BMQ99879 126 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 DOHHQ9BU89 302 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 ULBP3Q9BZM4 244 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 PTPRSQ13332 1948 aa1.52□□□□□ -2.17
PRKDC-205ENST00000535375 RP1L1Q8IWN7 2480 aaPredicted RBP1.51□□□□□ -2.17
PRKDC-205ENST00000535375 PIK3C2GO75747 1445 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 MDC1Q14676 2089 aaKnown RBP1.51□□□□□ -2.17
PRKDC-205ENST00000535375 USP24Q9UPU5 2620 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 TRBV10-2A0A0K0K1G8 114 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 PPBPP02775 128 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 CLPSP04118 112 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 SMIM10L2AP0DMW4 78 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 SMIM10L2BP0DMW5 78 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 FXYD2P54710 66 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 HBA1P69905 142 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 REEP5Q00765 189 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 OR5B17Q8NGF7 314 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 RASSF5Q8WWW0 418 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 TMEM147Q9BVK8 224 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 COMMD5Q9GZQ3 224 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 C11orf68Q9H3H3 251 aaKnown RBP1.51□□□□□ -2.17
PRKDC-205ENST00000535375 RALGAPA2Q2PPJ7 1873 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 SMARCA4P51532 1647 aa1.51□□□□□ -2.17
PRKDC-205ENST00000535375 NCKAP5O14513 1909 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 EXOC1LA0A1B0GW35 172 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 hADV38S2A0JD32 116 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 DPRXA6NFQ7 191 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 SIGLEC16A6NMB1 481 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 HMSDA8MTL9 139 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 ZNF737O75373 536 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 CIAO1O76071 339 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 NFYAP23511 347 aaPredicted RBP1.5□□□□□ -2.17
PRKDC-205ENST00000535375 HSD11B1P28845 292 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 CAPZBP47756 277 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 AQP4P55087 323 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 SUPT4H1P63272 117 aaKnown RBP1.5□□□□□ -2.17
PRKDC-205ENST00000535375 SLC38A11Q08AI6 406 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 CDK10Q15131 360 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 OR6V1Q8N148 313 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 H1FXQ92522 213 aaKnown RBP1.5□□□□□ -2.17
PRKDC-205ENST00000535375 TRIM4Q9C037 500 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 DOK5Q9P104 306 aa1.5□□□□□ -2.17
PRKDC-205ENST00000535375 KIAA2026Q5HYC2 2103 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 MEIS3P1A6NDR6 274 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 SLC22A1O15245 554 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 ATP5HO75947 161 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 ZNF682O95780 498 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 CYBAP13498 195 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 C12orf74Q32Q52 190 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 OR52L1Q8NGH7 329 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 TERB2Q8NHR7 220 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 PFN4Q8NHR9 129 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 CT55Q8WUE5 264 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 CMSS1Q9BQ75 279 aaKnown RBP1.49□□□□□ -2.17
PRKDC-205ENST00000535375 RNASE7Q9H1E1 156 aaKnown RBP1.49□□□□□ -2.17
PRKDC-205ENST00000535375 C8orf4Q9NR00 106 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 C14orf105Q9NVL8 296 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 MAST2Q6P0Q8 1798 aa1.49□□□□□ -2.17
PRKDC-205ENST00000535375 KIF24Q5T7B8 1368 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 PCF11O94913 1555 aaKnown RBP1.48□□□□□ -2.17
PRKDC-205ENST00000535375 ZNF860A6NHJ4 632 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 IBA57-AS1B1ANH7 110 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms