RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 C1QTNF9BB2RNN3 333 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 C1QTNF9P0C862 333 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 Q6AWC8 147 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM131CQ96AQ9 280 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 GREB1Q4ZG55 1949 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 REG1AP05451 166 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 MBNL2Q5VZF2 373 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM166AQ6J272 317 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 DDB2Q92466 427 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 ADMP35318 185 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 PAPPA-AS1Q5QFB9 102 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 PPP1R17O96001 155 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNRF1Q8ND25 227 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
PCDHA4-203ENST00000530339 CECR9P0C854 216 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 NEU4Q8WWR8 484 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 DCTN5Q9BTE1 182 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 MOSP00540 346 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 CX3CL1P78423 397 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 ST6GALNAC3Q8NDV1 305 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 TRAV1-1A0A0B4J248 108 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 MTURNQ8N3F0 131 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 SNRNP200O75643 2136 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 AMBPP02760 352 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
PCDHA4-203ENST00000530339 A0A1B0GUT8 65 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 NAPSAO96009 420 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 CLDN16Q9Y5I7 305 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 HAX1O00165 279 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 YPEL1O60688 119 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 NPPCP23582 126 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 ST6GALNAC6Q969X2 333 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 YPEL2Q96QA6 119 aa12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 ALKBH7Q9BT30 221 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-203ENST00000530339 IGHV2OR16-5A0A0B4J2B6 119 aa12.96□□□□□ -0.34
PCDHA4-203ENST00000530339 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.34
PCDHA4-203ENST00000530339 MST1P26927 711 aa12.96□□□□□ -0.34
PCDHA4-203ENST00000530339 WBP1Q96G27 269 aa12.96□□□□□ -0.34
PCDHA4-203ENST00000530339 PHLDA3Q9Y5J5 127 aa12.96□□□□□ -0.34
PCDHA4-203ENST00000530339 CFHR1Q03591 330 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 HEATR5BQ9P2D3 2071 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 FREM3P0C091 2139 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 OR11H12B2RN74 326 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 TMEM144Q7Z5S9 345 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 OR11H2Q8NH07 326 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 PLPPR1Q8TBJ4 325 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 H7C2G1 150 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 FDCSPQ8NFU4 85 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 FAM57AQ8TBR7 257 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 SCN8AQ9UQD0 1980 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 PEAR1Q5VY43 1037 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 SIP14410 1827 aa12.95□□□□□ -0.34
PCDHA4-203ENST00000530339 UMODP07911 640 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 EAF1Q96JC9 268 aaPredicted RBP12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 LHX2P50458 406 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 DPM3Q9P2X0 92 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 IL4P05112 153 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 CD55P08174 381 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 LTBRP36941 435 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 PYY3Q5JQD4 70 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 RNASE7Q9H1E1 156 aaKnown RBP12.94□□□□□ -0.34
PCDHA4-203ENST00000530339 HIGD1CA8MV81 97 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 GPR82Q96P67 336 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 TRBV20OR9-2A0A075B6H5 130 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 PSG7Q13046 419 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 TEX38Q6PEX7 206 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 PNKDQ8N490 385 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 NEUROG1Q92886 237 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 WDR83OSQ9Y284 106 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 CGB1A6NKQ9 187 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 HIST1H1AQ02539 215 aaPredicted RBP12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 OCC1Q8TAD7 63 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 GNB1LQ9BYB4 327 aa12.93□□□□□ -0.34
PCDHA4-203ENST00000530339 A0A1B0GV72 72 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms