RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 STPG2Q8N412 459 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 VSTM2AQ8TAG5 236 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 TMEM56Q96MV1 263 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 PARP11Q9NR21 331 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 NUDT15Q9NV35 164 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 LINC00527Q9UJ94 153 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 TMEM56-RWDD3S4R434 201 aa6.82□□□□□ -1.32
CCDC90B-217ENST00000530253 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 TEX22C9J3V5 150 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 E7EUB6 86 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 G3V318 75 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 SOX15O60248 233 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 SFT2D2O95562 160 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 KRASP01116 189 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 ANXA7P20073 488 aaKnown RBP6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 FXYD3Q14802 87 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 IZUMO4Q1ZYL8 232 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 TRIM16LQ309B1 348 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 ANKRD55Q3KP44 614 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 TCTEX1D4Q5JR98 221 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 LCE1EQ5T753 118 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 NRARPQ7Z6K4 114 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 FOXRED2Q8IWF2 684 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 SELENOHQ8IZQ5 122 aaKnown RBP6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 C3orf56Q8N813 242 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 LRTM2Q8N967 370 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 MINDY2Q8NBR6 621 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 DUSP18Q8NEJ0 188 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 SGMS2Q8NHU3 365 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 SRSF12Q8WXF0 261 aaKnown RBP6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 ARPC1AQ92747 370 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 IL22RA2Q969J5 263 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 CITED1Q99966 193 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 FAM103A1Q9BTL3 118 aaKnown RBP6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 ALX4Q9H161 411 aaPredicted RBP6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 PALMDQ9NP74 551 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 NUBP2Q9Y5Y2 271 aa6.81□□□□□ -1.32
CCDC90B-217ENST00000530253 TRAV41A0A0B4J266 112 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 FAM240BA0A1B0GVZ2 78 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 C9orf170A2RU37 121 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 C15orf61A6NNL5 157 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 CREBL2O60519 120 aaPredicted RBP6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 OR4E1P0C645 316 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 SPNP16150 400 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 HLA-GP17693 338 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 MAS1LP35410 378 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 OR2B8PP59922 312 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 ERVK-16P61578 105 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 GNB1P62873 340 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 RPL8P62917 257 aaKnown RBP6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 DHRS2Q13268 280 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 TNXAQ16473 311 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 AARDQ4LEZ3 155 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 NMSQ5H8A3 153 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 TMEM268Q5VZI3 342 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 HIST2H2BDQ6DRA6 164 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 SLC35G3Q8N808 338 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 DMBX1Q8NFW5 382 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 GRPEL2Q8TAA5 225 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 CHPT1Q8WUD6 406 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 TMEM14BQ9NUH8 114 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 NSG2Q9Y328 171 aa6.8□□□□□ -1.32
CCDC90B-217ENST00000530253 TRAV6A0A075B6T7 132 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 A0A0B4J293 547 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 A0A0B4J2A0 478 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 PSMB11A5LHX3 300 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 IGHG4P01861 327 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 HLA-AP01891 365 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 CD28P10747 220 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 DEFA1P59665 94 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 DEFA3P59666 94 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 SRPXP78539 464 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 ECSCRQ19T08 205 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 AKIRIN2Q53H80 203 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 C9orf47Q6ZRZ4 202 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 LYZL2Q7Z4W2 148 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 LYG2Q86SG7 212 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 ZNF329Q86UD4 541 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 LGI3Q8N145 548 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 RNF152Q8N8N0 203 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 LFNGQ8NES3 379 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 OR52B4Q8NGK2 314 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 MYOZ3Q8TDC0 251 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 LSM10Q969L4 123 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 GPR146Q96CH1 333 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 SHPKQ9UHJ6 478 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 FOXA2Q9Y261 457 aaPredicted RBP6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 KCNIP3Q9Y2W7 256 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 WSB1Q9Y6I7 421 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 PLXNB1O43157 2135 aa6.79□□□□□ -1.32
CCDC90B-217ENST00000530253 TNCP24821 2201 aa6.78□□□□□ -1.32
CCDC90B-217ENST00000530253 TEX50A0A1B0GTY4 177 aa6.78□□□□□ -1.32
CCDC90B-217ENST00000530253 DUXBA0A1W2PPF3 345 aa6.78□□□□□ -1.32
CCDC90B-217ENST00000530253 IGLC7A0M8Q6 106 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms