RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.69
CD44-224ENST00000526669 TRGV3P03979 118 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 RPLP1P05386 114 aaKnown RBP10.71□□□□□ -0.69
CD44-224ENST00000526669 H2BFSP57053 126 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 S100A10P60903 97 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 ERHP84090 104 aaKnown RBP10.71□□□□□ -0.69
CD44-224ENST00000526669 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 OR2C3Q8N628 320 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 TMEM68Q96MH6 324 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 KLK15Q9H2R5 256 aa10.71□□□□□ -0.69
CD44-224ENST00000526669 FAM90A26D6RGX4 464 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 SYNGR2O43760 224 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 MED6O75586 246 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 OR2J3O76001 311 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 DEFA4P12838 97 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 MFAP2P55001 183 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 TPPP2P59282 170 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 RAB32Q13637 225 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 LRRC37A5PQ49AS3 106 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 TCTEX1D4Q5JR98 221 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 SLC25A24Q6NUK1 477 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 TEX38Q6PEX7 206 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 MRPL41Q8IXM3 137 aaKnown RBP10.7□□□□□ -0.7
CD44-224ENST00000526669 P2RX4Q99571 388 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 SRSF8Q9BRL6 282 aaKnown RBP10.7□□□□□ -0.7
CD44-224ENST00000526669 PAIP2BQ9ULR5 123 aaKnown RBP10.7□□□□□ -0.7
CD44-224ENST00000526669 DMRT1Q9Y5R6 373 aa10.7□□□□□ -0.7
CD44-224ENST00000526669 IGHV3-21A0A0B4J1V1 117 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 A0A1B0GVG6 124 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 A0A1W2PRX2 142 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 H3BP45 60 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 K7EPK0 472 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 CRYGCP07315 174 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 ELANEP08246 267 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 RNASE2P10153 161 aaKnown RBP10.69□□□□□ -0.7
CD44-224ENST00000526669 PSMB8P28062 276 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 ID3Q02535 119 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 FOXE3Q13461 319 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 PDLIM3Q53GG5 364 aaPredicted RBP10.69□□□□□ -0.7
CD44-224ENST00000526669 TMEM65Q6PI78 240 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 HSD17B13Q7Z5P4 300 aaPredicted RBP10.69□□□□□ -0.7
CD44-224ENST00000526669 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 CITED2Q99967 270 aaPredicted RBP10.69□□□□□ -0.7
CD44-224ENST00000526669 HIPK2Q9H2X6 1198 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 F11RQ9Y624 299 aaKnown RBP10.69□□□□□ -0.7
CD44-224ENST00000526669 S4R3C0 116 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 CMYA5Q8N3K9 4069 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 ANK2Q01484 3957 aa10.69□□□□□ -0.7
CD44-224ENST00000526669 NDUFB8O95169 186 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 IFNA10P01566 189 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 SNCAP37840 140 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 RAB9AP51151 201 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 RHOGP84095 191 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 COMMD1Q8N668 190 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 C3orf56Q8N813 242 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 MISP3Q96FF7 219 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 OR5B12Q96R08 314 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 NMES1Q9C002 83 aa10.68□□□□□ -0.7
CD44-224ENST00000526669 IGLV11-55A0A075B6I3 123 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 H3BUA1 57 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 NPY1RP25929 384 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 IL15RAQ13261 267 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 SLC24A4Q8NFF2 622 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 TMEM170AQ8WVE7 144 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
CD44-224ENST00000526669 OR4C12Q96R67 309 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 ZNF436Q9C0F3 470 aaPredicted RBP10.67□□□□□ -0.7
CD44-224ENST00000526669 GNB4Q9HAV0 340 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 PSENENQ9NZ42 101 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 CACFD1Q9UGQ2 172 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 FBXL7Q9UJT9 491 aa10.67□□□□□ -0.7
CD44-224ENST00000526669 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 L7N2F9 121 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 TMEM50AO95807 157 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 HTR2BP41595 481 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 PAX9P55771 341 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 RPL23AP62750 156 aaKnown RBP10.66□□□□□ -0.7
CD44-224ENST00000526669 VAMP2P63027 116 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 CD83Q01151 205 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 KIAA0141Q14154 515 aaPredicted RBP10.66□□□□□ -0.7
CD44-224ENST00000526669 SPANXN5Q5MJ07 72 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 ZNF491Q8N8L2 437 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 OR1P1Q8NH06 330 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 PPP1R1CQ8WVI7 109 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 CIB3Q96Q77 187 aaPredicted RBP10.66□□□□□ -0.7
CD44-224ENST00000526669 SLA2Q9H6Q3 261 aa10.66□□□□□ -0.7
CD44-224ENST00000526669 TRBV9A0A0B4J1U6 114 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 MFSD2BA6NFX1 497 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 C15orf62A8K5M9 175 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 NUDT19A8MXV4 375 aa10.65□□□□□ -0.7
CD44-224ENST00000526669 CCNKO75909 580 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms